Ictalurus punctatus (channel catfish): 108266836
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Entry
108266836 CDS
T04658
Symbol
htr1fa
Name
(RefSeq) 5-hydroxytryptamine receptor 1F
KO
K04153
5-hydroxytryptamine receptor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108266836 (htr1fa)
04082 Neuroactive ligand signaling
108266836 (htr1fa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108266836 (htr1fa)
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Biogenic amine
Serotonin
108266836 (htr1fa)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
108266836
NCBI-ProteinID:
XP_017326110
UniProt:
A0A2D0R8F6
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Position
6:22328945..22337732
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AA seq
368 aa
AA seq
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MDPNSTDGAKSADGLGRSPAGMILLSLTLSVLAILTTAINSLVITAIIVTRKLHHPANYL
ICSLAVTDLLVAILVMPFSIVYIVKETWVMGEVMCTIWLSVDITCCTCSILHLAAIAVDR
YRAITDAVEYSRKRTSLRAAVTISVVWLLSILISLPPMLWGHHKKEEQENECLIKHENIA
FTLYCTFGAFYIPLILILILYYKIYKAAKIIYHKRRPSPMNKLEINGHKIPMCPEREQQS
LDALALPEKSMSEPSTEGDRGRFSSASPNFQPHSERSIKRQRISGARERKAAMTLGLILG
AFVICWLPFFIQEVIINICISCIPSNEITTFLTWLGYLNSLINPLIYTIFNEDFKKAFHK
LIKCRNEL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaacagcacagatggggctaagtctgcagacggacttggtagaagtcctgca
ggcatgatccttctctctctcactctgtctgtgctggctatactaactacagcaatcaac
tccttagtcatcactgccatcattgtcactcgaaaacttcaccaccctgccaactacctt
atctgctctctggctgtgacggacctgctggtggctatcctggtcatgcccttcagcatc
gtctacattgtgaaggagacatgggtcatgggtgaggtgatgtgcaccatctggcttagc
gttgacattacctgctgcacatgctccattttgcacttggcggctattgctgtggatcgt
tatcgcgctataacggatgctgtggaatactccaggaagaggacatctctaagggctgct
gtcacgattagtgtcgtctggctcctgtccattctcatttccctaccgccgatgctctgg
ggacaccacaaaaaagaagagcaggagaacgaatgccttataaagcatgaaaacattgct
ttcaccctttactgcacatttggggccttctacatcccacttatactcatccttatcctt
tactacaaaatatacaaagcagctaaaattatttaccacaaaagaaggcccagccccatg
aacaagcttgagataaatggacacaagatccctatgtgcccagaacgagaacagcagagt
cttgatgcactcgccttaccagagaagtcaatgtcagaaccctctactgagggcgacagg
ggacgtttctcttcagcaagcccaaattttcagcctcacagtgagaggtccattaaaaga
caacggatttcaggggcacgtgaaagaaaggcagccatgacccttgggcttattcttggg
gcatttgtcatctgttggctgccattcttcattcaggaagtgattattaacatatgcatc
agctgcatcccctccaatgaaataactacatttctgacctggctagggtaccttaactca
ctaatcaacccactcatttataccatcttcaatgaggacttcaagaaagcctttcataaa
ttgatcaaatgtcggaatgagctctga
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