KEGG   Ictalurus punctatus (channel catfish): 108266861
Entry
108266861         CDS       T04658                                 
Symbol
zgc:101559
Name
(RefSeq) ras-related protein Rab-33B-like
  KO
K07920  Ras-related protein Rab-33B
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108266861 (zgc:101559)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108266861 (zgc:101559)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108266861 (zgc:101559)
   04031 GTP-binding proteins [BR:ipu04031]
    108266861 (zgc:101559)
Membrane trafficking [BR:ipu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab GTPases
    108266861 (zgc:101559)
 Others
  Specific organelles associated proteins
   Auto phagosome
    108266861 (zgc:101559)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   108266861 (zgc:101559)
GTP-binding proteins [BR:ipu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab33
    108266861 (zgc:101559)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU G-alpha SRPRB ATP_bind_1 PduV-EutP FeoB_N TniB Septin AAA_14 DUF3713
Other DBs
NCBI-GeneID: 108266861
NCBI-ProteinID: XP_017326157
Ensembl: ENSIPUG00000022394
UniProt: A0A2D0R6C8
LinkDB
Position
6:21823917..21829006
AA seq 230 aa
MAAEHQNADPDTATVCDRDSLANDSFQDSFQTRVFKIIVIGDSNVGKTCLTYRFCEAKFL
KNPEATIGVDFREKTLELGGENIKLQIWDTAGQERFRKSMVEHYYRSVHAVIFVYDVSNL
ASFENLPEWIEECRRHSVPLNVPHILVGNKCDLGRGEVPTSLAQRLADSYNFPLFETSAK
DPAEKEHVDAIFLTLAHKLKNHKPLRLKQPSGSTATPLTSEQEEKKLCFC
NT seq 693 nt   +upstreamnt  +downstreamnt
atggcagctgaacaccaaaatgctgaccctgataccgctacggtctgtgacagagacagt
cttgcgaatgattcgtttcaggacagttttcagacaagggtatttaaaataattgtcatt
ggtgactccaatgttggaaaaacgtgtttaacctataggttctgtgaagctaaatttctt
aaaaacccagaagccacaattggagttgacttcagagagaagacccttgagctgggggga
gaaaatatcaagttgcagatttgggacacagcaggacaggagcgattcagaaagagtatg
gtggaacattactaccgcagtgtgcatgctgtgatctttgtgtatgatgtaagcaacctg
gcctccttcgaaaatctgcccgagtggattgaggagtgtaggcgccactcagtcccactg
aacgtgccccacatcttagtagggaacaaatgtgacttaggaagaggagaggttcccacc
tcattggcacagcgactagctgacagctataatttccccctctttgagacgtctgccaag
gaccctgctgagaaggagcatgtggatgccattttcctcaccctggcccacaagctgaag
aatcacaagcccctgaggctgaaacagccaagtggaagcactgcaacacccctgaccagc
gagcaggaagagaagaagctctgtttctgctga

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