Ictalurus punctatus (channel catfish): 108266861
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Entry
108266861 CDS
T04658
Symbol
zgc:101559
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108266861 (zgc:101559)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108266861 (zgc:101559)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108266861 (zgc:101559)
04031 GTP-binding proteins [BR:
ipu04031
]
108266861 (zgc:101559)
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
108266861 (zgc:101559)
Others
Specific organelles associated proteins
Auto phagosome
108266861 (zgc:101559)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108266861 (zgc:101559)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
108266861 (zgc:101559)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
G-alpha
SRPRB
ATP_bind_1
PduV-EutP
FeoB_N
TniB
Septin
AAA_14
DUF3713
Motif
Other DBs
NCBI-GeneID:
108266861
NCBI-ProteinID:
XP_017326157
Ensembl:
ENSIPUG00000022394
UniProt:
A0A2D0R6C8
LinkDB
All DBs
Position
6:21823917..21829006
Genome browser
AA seq
230 aa
AA seq
DB search
MAAEHQNADPDTATVCDRDSLANDSFQDSFQTRVFKIIVIGDSNVGKTCLTYRFCEAKFL
KNPEATIGVDFREKTLELGGENIKLQIWDTAGQERFRKSMVEHYYRSVHAVIFVYDVSNL
ASFENLPEWIEECRRHSVPLNVPHILVGNKCDLGRGEVPTSLAQRLADSYNFPLFETSAK
DPAEKEHVDAIFLTLAHKLKNHKPLRLKQPSGSTATPLTSEQEEKKLCFC
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgaacaccaaaatgctgaccctgataccgctacggtctgtgacagagacagt
cttgcgaatgattcgtttcaggacagttttcagacaagggtatttaaaataattgtcatt
ggtgactccaatgttggaaaaacgtgtttaacctataggttctgtgaagctaaatttctt
aaaaacccagaagccacaattggagttgacttcagagagaagacccttgagctgggggga
gaaaatatcaagttgcagatttgggacacagcaggacaggagcgattcagaaagagtatg
gtggaacattactaccgcagtgtgcatgctgtgatctttgtgtatgatgtaagcaacctg
gcctccttcgaaaatctgcccgagtggattgaggagtgtaggcgccactcagtcccactg
aacgtgccccacatcttagtagggaacaaatgtgacttaggaagaggagaggttcccacc
tcattggcacagcgactagctgacagctataatttccccctctttgagacgtctgccaag
gaccctgctgagaaggagcatgtggatgccattttcctcaccctggcccacaagctgaag
aatcacaagcccctgaggctgaaacagccaagtggaagcactgcaacacccctgaccagc
gagcaggaagagaagaagctctgtttctgctga
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