KEGG   Ictalurus punctatus (channel catfish): 108266914
Entry
108266914         CDS       T04658                                 
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108266914 (sox21b)
Transcription factors [BR:ipu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    108266914 (sox21b)
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp HMG_WDHD1
Other DBs
NCBI-GeneID: 108266914
NCBI-ProteinID: XP_017326233
Ensembl: ENSIPUG00000014840
UniProt: A0A2D0R6L5
LinkDB
Position
6:complement(931412..935789)
AA seq 242 aa
MSKSSDHVKRPMNAFMVWSRAQRRQMAQENPKMHNSEISKRLGAEWKLLTDSEKRPFIDE
AKRLRALHMKEHPDYKYRPRRKPKTLAKKEKFALALPYGMHAEAETLKPSADSLLRTSDR
ARILFAPSLCANPYSFLDFGSKMADFSPPPPPPPPLPPAMPSFPYPSPLGFPPFSGVHAH
TSAHNPAFLMPCSCSAWPSSSTTSSSSSTSSSSSFSTPLAYILLPGVGKAPIEPYHAYAT
AL
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtcgaagtcttcggaccacgtgaaacgcccgatgaacgccttcatggtctggtctcga
gcccagcgccggcagatggcacaagagaacccgaagatgcacaactcagagatcagtaag
cgtctcggcgccgagtggaagctgctaaccgactccgagaagcgtccattcatcgacgag
gccaagcgactgcgcgcgctgcacatgaaggagcaccccgactacaaataccggccaaga
cggaaaccgaagactctcgccaagaaggagaagtttgcgctggctctgccgtacggcatg
cacgcggaagcggaaacgctaaaaccttccgccgactccttattgcgcacctcggacaga
gcgaggatcctgttcgcaccgtcactctgcgccaacccatactcctttttggattttgga
tccaagatggctgacttctctccacctccacctcctccacctcctctccctccagcaatg
ccgtcgttcccgtacccatcgccgctgggtttcccgcctttttcaggagtccacgcgcac
acgagcgcacacaatccggcctttctgatgccgtgcagctgcagcgcgtggccttcgtcg
tcgacgacatcgtcatcatcatctacgtcgtcttcgtcatcgttttcaacgccgttggcg
tacatcctgctgcctggcgtcggcaaagcaccgatcgagccgtatcacgcctacgccact
gcgttatga

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