Ictalurus punctatus (channel catfish): 108266958
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Entry
108266958 CDS
T04658
Name
(RefSeq) short stature homeobox protein
KO
K09331
short stature homeobox protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266958
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108266958
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
OAR
MRP-L20
CCDC53
AcrF31
DUF7796
PIMMS43_C
Motif
Other DBs
NCBI-GeneID:
108266958
NCBI-ProteinID:
XP_017326285
Ensembl:
ENSIPUG00000023408
UniProt:
A0A2D0R8Y8
LinkDB
All DBs
Position
6:complement(20574330..20583127)
Genome browser
AA seq
302 aa
AA seq
DB search
MEELTAFVSKSFDQKSKESSKESITYREVLESGLARARELGNSDGSLQDITDSNTHCPVH
LFKEHVELDKDKLKEFNVARASDGIYECKEKKEEVKSEDEDAQGKLKQRRSRTNFTLEQL
NELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGSAS
HLDACRVAPYVNMGALRMPFQQVQAQLQLEGVTHSHPHLHPHLAAHAPYLMFPPPPFGLP
IASLADSASAAAAVAAAAKSNSKNSSIADLRLKAGLLGGHWLSPFQAQITAPGPYKNIWM
SV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctcacagcgttcgtgtcgaaatccttcgaccagaagagcaaggagagcagt
aaagagagcatcacgtacagggaagttttggagagcggcttagcgcgggccagggagctg
gggaactcggatggcagcctgcaggacattaccgacagcaacactcactgtcccgtacat
ctattcaaggaacacgtggagctggacaaggacaagctgaaggagtttaacgtggccagg
gcgagcgacgggatttatgagtgcaaagaaaagaaggaagaggtgaaatcggaggacgag
gacgcccagggtaaactgaaacagagacggagcaggacaaattttaccttagagcagctg
aatgaactggagcgcttgtttgatgagacgcattacccggacgcgttcatgcgagaagag
ctgagccaaagactggggctctctgaggccagggttcaggtatggtttcagaacagaaga
gcaaaatgccgaaaacaagaaaaccagatgcacaaaggtgtgattttgggctccgccagt
cacttggacgcatgcagagtcgctccctacgttaacatgggcgccctgagaatgccattt
caacaggtccaagcgcagctccagttggagggggtgacccattcgcatccccacctgcac
ccccacctggcagcacatgctccctatctgatgttccctcctccaccgttcggactacca
atcgcatcgctggcagactcagcctcggcagcggccgctgtagcagcggctgccaagagc
aacagcaagaattccagcatcgctgacctgcgactcaaggcaggactgcttggaggccac
tggctcagccctttccaggcccagatcacagccccaggaccatacaaaaatatctggatg
tctgtctga
DBGET
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