Ictalurus punctatus (channel catfish): 108266964
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Entry
108266964 CDS
T04658
Symbol
hoxd3a
Name
(RefSeq) homeobox protein Hox-D3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266964 (hoxd3a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108266964 (hoxd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
108266964
NCBI-ProteinID:
XP_047011926
Ensembl:
ENSIPUG00000019869
UniProt:
A0A979EVN6
LinkDB
All DBs
Position
6:24289140..24309676
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AA seq
395 aa
AA seq
DB search
MQKATYYDNAGLFGGYSYSKSDSYAYGPAHQSYPTSSIENDYQGPICSVQSTTVRPPVHK
NSDINGSCMRPNGSQGSQPESVGDQQQASPLAPTSPNSSSTTTQKKKSPNNNGSNTATPV
ITKQIFPWMKETRQNSKQKSTNCTTPGETCDDKSPPGPASKRVRTAYTSAQLVELEKEFH
FNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKGIMHSPLGHSPDRSPPLS
GPNHVGYSGQLPNVNSLNYDAPSPPSFAKPQQNMYGLAAYTAPLGGCIPQQKRYPGAEYE
HHGMQGNGSFANANLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSASVDYSCAAQIPG
NHHHGPCDPHPTYTDLSSHHTSQGRLQEAPKLTHL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagccacttattatgataacgctggactttttggaggctactcatactcaaag
tctgactcatatgcgtatgggcccgcccatcagtcctaccccacctccagcatagaaaat
gactatcagggtcccatctgttcagtacaatctacaacagtccggccgccggtgcacaaa
aacagcgacatcaatggcagctgtatgcgaccaaatggtagccaaggcagccaaccagag
agtgttggtgaccaacaacaagcgtctcctttagcacccacctcacccaactcaagcagc
accaccacccagaaaaagaaatctcccaacaacaatggctccaacactgccaccccagtc
atcaccaagcaaatattcccatggatgaaggagacgcgtcagaattcaaagcagaaaagt
accaactgcacaactccaggagagacctgcgatgacaaaagtccacctggtccggcctcc
aagcgtgtgcgcactgcttacaccagcgcccagctcgtggagctcgagaaagaattccac
tttaatcgttatttatgccgaccacgaagagtcgagatggccaatctgctcaatctcacc
gagcgccaaataaagatctggtttcaaaacaggagaatgaagtacaaaaaggatcagaaa
tccaagggaataatgcactctcccttaggacactctccggacagaagcccgccgctaagt
gggcccaatcacgttggatattctggtcagcttccaaatgtaaacagcctgaactatgat
gccccgtctcctccgtcattcgccaaacctcagcaaaatatgtacggcttggctgcgtat
acggcgccgttgggcggctgtataccgcagcaaaaaaggtacccgggtgcagagtatgag
caccacggcatgcaagggaacggaagctttgccaatgctaatttgcaaggcagtcctgtg
tatgttgggggaaattttgttgattcgatgccagcttcgggccctatgttcaacctcggt
caccttcctcatccttcatccgccagtgtggactacagttgtgccgctcagattccgggc
aatcaccatcatggaccgtgtgaccctcaccccacatacacagacctcagctctcaccac
acttctcagggaaggctgcaggaagcgccgaaacttactcatttgtaa
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