Ictalurus punctatus (channel catfish): 108266994
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Entry
108266994 CDS
T04658
Name
(RefSeq) uncharacterized protein LOC108266994 isoform X1
KO
K23283
RUN and SH3 domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108266994
Membrane trafficking [BR:
ipu04131
]
SNARE
SNARE associated proteins
Others
108266994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
SH3_1
SH3_2
SH3_9
Cytomega_UL20A
Motif
Other DBs
NCBI-GeneID:
108266994
NCBI-ProteinID:
XP_017326337
UniProt:
A0A2D0R6X2
LinkDB
All DBs
Position
1:12623897..12639821
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AA seq
1887 aa
AA seq
DB search
MHSSRPSIPPRTRRFDSGRRTEAKPPNHAARREDKNVSSISSSPRRTTRAPPEPSRLKGI
GLSARTTVTQNRTVRHQKTSTPAVPGKSKGGAKGGHVASNQGPAIVDPNCNEPSLPCLCC
DGHSPQDSNSLFNHNHNNNNTVTIRQQLKLVPSPQEKKESEKPDIGKATCKPEEEQPVAS
PVAKHMEDKKEEENGNVDEIDGAVPKDDDIVANVIAKVDENGNGNNQDANVDNDDVNDDD
DDDDDNEDDEEDDDNTLVPSSCDCPASMLDFSLTSSTSSSSTSISSCSDLDSDCPDTFSV
SLQEEEEEDEATEHYSSPHPPASHSTVFPYCSIPLSTSVRSPSPCSPDEGYPSAPPSPSS
GCIEGKVPKKEKGIKVDLLNFLDSIDELGKVDHFYRIVQLANWELKDDLDLRYRLVHQER
LEKVNKQVRLVHLERLQEAGLDVSDEDISGVLDDMGNTDISWKLYKSDSSCDSQEYSDAG
VDMTAPSDLDEPPIPDSLAPSPVNPPPRPPKPLARHVSAQPEMHTYMNISGSTPSVSSNS
SPAKTFSLSVSQTSSLISSSVSKPPVLPPSQPVPYFTLYTDATTLSSPTPPIPPPRRRHK
ARLEALRLAELERLKTPQSLPAPSSRPPPLPPPPALPSPPAIPPPPLLPPPPSFHALDVE
IRKLLALAGITQAELLRLSPELGVCVDGVLEEEQTSDPLNIKDVCVSETSKEKQEDVNKG
KKFTCWELREGSKLGKEETYIDEKNEECKDTFRTMSFTEMAKWHKQNEGSSNSSCNCGLR
DNASLTTDSYYSTSISSKQFTNSSFGNFDYASEIPDSPPPPPPPRPLPPRPKILPKPPEL
PPVKPCALSANSSRPDRFDWLIAFTPDTETPPLEMRKASTNATSQNSSSVPKVTTFKELR
NRGKHASPPTQIKREPEPTVITPDPDFLYNLKWRREKADGDGTQWEYTSQAQTTFLQPPP
TPASLALFREIRHLNVQADATLDPGPMQQISGSANKTNQYNLIDDRNGEHYKTKDEGMGE
TEVRGMADGGQTLESRTRLSSPPLSLALPSPLPSPYYLHSSSPTQVPLFYRADFYRNQSK
AQSIQEHPRNPLCHMNPTSNSVTDFTDSLFCPDSKKQAEFFCRHENPSSSIGYSNSDSFM
DSLYQYSDTKKNESCYYRRESVSNFGSLYDNHLDSNSNVGSLYFGDKYKMKTMTDKPYTS
TNTEGNTTPYKNIDMIHYVNAEKLNKLSDGTKDTKEDLNSMFSFEETNVLGSVDNAFSDQ
KILEEKSYSSPFPTLYLYHPKNCPLHKGAPPRLSPVGAISPPHRAGPLSPGASMSRLCSP
LFPRSHTLPALAAPLYYPYLYTPRALAPPREPLAPKLQSKQNASPLSLTVRSLSFAGSAA
KAGAWMGDDEKPPLIGDELSPLCLQEKRALISSVSVAVEAILAQFSSSRTLVQKIHSVDK
ALSGDSSVNPALGRLVLQCLCPALHGLLCDGLKPHQSDLITGRRPNSTWGLVQASTKPGP
NTQALYSLQAKIAALPQLKQSRHRFNAFLLGLLNIKRLDYWLSHLQTCHDVLETYYWPTS
FMRLSGSLCQSFFEELLLMLQPLSLLTFNLDLLFQHHHFDPLSPALSPPSRSPQSSSPDQ
PQSNGQHLKKVSKQGFTDPKAASHNSSPTSTFKAISGIGKGETSPQLQWLQEKEIIAPPS
IWSGNSFSQQAGQALQQGWGAVIRLGERLGQNWSGLTSTGLSEEAKAHTITDLNTHSNSN
CPKNPSQELLTAEGGTASWGLGRLFGASKSPNDPPRKRRPSHWLNPGITVLSRISNTGHA
FLPEKIEPGRNEEREKGKNDKSKETGVQSKPVRAVRTLCDHMGTGAELSFRKGEELLLLG
GVDQDWIRCRQGDKEGLVPIGYASLIM
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgcactcttcaaggccctccattcccccacgaacacgtcgatttgacagtggcagacgt
acagaagcaaaaccacccaaccatgcagccaggagggaggacaaaaatgtaagcagcatt
tcttcatcccctcgtcgtaccacacgagcaccacctgagccttccaggttaaagggcata
ggtctgagtgctcgaaccacagtgactcagaacagaacggtccgacatcagaaaacctct
acccccgcagtaccaggcaagtctaagggtggagctaagggtggacatgtggcgtcaaac
cagggccctgctattgtagatccaaactgtaatgaaccaagcctgccttgcctgtgttgt
gatggccactcacctcaggacagcaacagcttattcaatcacaaccataacaacaataac
actgtgaccatcaggcagcagctcaagcttgtcccatcacctcaggagaaaaaggagtct
gaaaaaccagacattggaaaagccacatgtaagccagaggaggagcagcctgtagctagt
cctgtagctaaacacatggaggacaaaaaggaagaggaaaatggaaatgtggatgaaata
gatggagctgttcccaaggatgatgacattgtggctaatgtgattgcaaaagtagatgag
aatggaaatggtaataatcaagatgctaatgttgataatgatgatgtcaatgatgatgat
gatgatgatgatgataatgaggatgacgaagaagatgatgacaacacacttgtaccttct
tcctgcgattgcccagcatcaatgttggacttctctctcacgtcttctacctcatcttca
tccacctccatcagcagctgctcagatttggattctgattgccctgatacattttcagtg
tctctgcaagaagaagaagaagaagatgaagcaactgaacattattcttcacctcatccc
ccagcatcccactccactgtttttccatactgctccataccactcagcacttcagtgaga
tcaccatctccatgctcccctgatgagggatatccttcggctcccccgtccccttcatca
ggatgtatagaaggcaaggtacctaagaaagaaaaaggtattaaagtagatcttttgaac
tttttggactctattgatgaattaggcaaagttgatcacttttatcgaattgttcagcta
gcaaattgggagctcaaggatgatttggatctaagatataggctggtgcaccaagaaagg
cttgaaaaagtcaataagcaggtgagacttgtgcatctggaaagactgcaggaagctgga
ttggacgtttctgatgaagatatttctggagtacttgatgacatgggcaatactgacatt
tcctggaagctttataaaagtgacagctcatgtgattcccaagaatacagtgatgctggg
gtagatatgacagccccatctgacctggatgaacctccaattccagattcccttgcacca
tcacctgtaaatcctcctcctcgcccccccaaacctctagcaagacacgtcagtgcccaa
ccagaaatgcacacatacatgaacatcagtgggagtacaccttcagtttcctctaactcc
tccccagctaaaaccttcagtctctcagtttcccaaacttcgtctctgatttcatcttca
gtatcaaaaccccctgtgttgccaccatcacagcctgttccttatttcaccttgtataca
gatgcaaccacactctcctcacccactccgcccattccacctcccagaaggcggcataaa
gcccgtctagaagctctaaggcttgctgagcttgagagactgaagacacctcagtctctt
cctgctccatcttccagacctccacctctgccacctccaccagctttgccctctcctcct
gccattccaccacctccattactcccacctcctccatcattccatgctttggatgtagag
atacggaagctgctggcactggcagggatcacccaggctgagttactaaggcttagccct
gagttgggtgtctgtgttgatggggtcttggaagaagaacaaacatctgatcctttgaac
atcaaagatgtttgtgttagtgagacaagcaaagagaagcaagaggatgtgaacaaggga
aaaaaatttacctgttgggagctgagagagggcagtaagcttgggaaagaggaaacgtac
atagatgaaaagaatgaagaatgcaaggacactttcaggacaatgtccttcacagagatg
gccaagtggcacaagcagaatgaaggtagtagtaactctagctgcaattgtggtttgagg
gataatgccagcttgacaactgactcatattacagcacatctatcagcagtaaacagttc
actaattctagctttggcaattttgattatgcctcagagattcctgattcccctcctccc
cctccccctccacgacctttacctccacggccaaaaatattgcctaaaccacctgaactt
cctcctgtaaagccatgtgctctatctgccaattcatctcgtccagatagatttgattgg
ctgatagcctttactccagacacagagaccccccccctagaaatgagaaaagcatctact
aatgccacatcacaaaactccagctctgttccaaaagtcactacatttaaagaattgcgc
aacagaggtaaacatgcttccccaccaactcaaatcaaacgagaacctgaaccaactgtc
atcactcccgatccagatttcctgtataaccttaagtggaggagagagaaggctgatggg
gatggcacccagtgggagtatacttcccaagcacagaccacctttctccagccaccaccc
acacctgcctcattggctctatttagggaaatacgccacttgaatgttcaggccgatgca
actctggatcctggccccatgcaacaaattagtggctcagccaataagaccaatcagtat
aacttgattgatgacagaaacggagaacattacaagacaaaggatgaaggcatgggggag
acagaggtcagaggaatggcagatggaggacagacattggaatcaagaacaagactgtcc
tcacctcccttgtctttagccttgcctagccctttgccctcaccgtattatctacactcc
agctccccaacccaagtacccctattttaccgtgcagacttttataggaatcagtcaaaa
gcgcagtctattcaggaacatcccagaaaccctttgtgtcatatgaatcctacttctaac
tctgttacagacttcaccgactctctcttctgccctgactcaaaaaaacaggcagaattt
ttctgtcgccatgagaatccttccagttccattggttatagtaattcagacagctttatg
gattctttgtatcaatactctgataccaagaaaaacgagagctgttactatagaagggag
tctgttagcaactttgggtcattgtatgataaccatttagattcaaacagtaatgtaggt
tcactctactttggtgataaatacaagatgaaaaccatgactgacaagccatatacaagc
acaaacactgaaggtaatacaaccccatacaaaaatattgacatgatacactatgttaat
gcagaaaagctcaacaaactgagtgatggtaccaaagacaccaaggaagatctgaattcc
atgttcagctttgaggagaccaatgtcctaggttcagttgacaatgcatttagtgaccag
aaaatattggaggaaaaatcctatagctcgcccttccctaccctgtacctctaccacccc
aaaaattgccctctgcataaaggagctcctccccgtttgtcccctgtaggagcaatttca
ccccctcatagggctgggcctctgtctccaggggccagcatgtcccgtctctgttcaccc
ctattccctcgcagtcacacgctgcctgctcttgctgccccgctctattacccctacctg
tacaccccccgagctctggctcctcccagggagccactggcccccaaactccaatctaag
cagaacgcatcaccactgtcactaactgtacgcagcctgtcctttgctggttctgctgca
aaagcaggggcctggatgggcgacgatgagaagcccccactgataggtgatgaactgtcc
cctctttgcctgcaggaaaaacgagctctcattagttcagtcagtgtggcagtggaggcc
attctggctcagttcagctcctctaggactcttgtgcagaagattcactcagtagataag
gctctctctggagacagcagtgtaaaccctgctctgggtcggctggtgttgcagtgcctt
tgcccggccctgcacggacttctctgtgacggactcaaaccccatcagagtgatctcatc
acaggcaggaggccaaattcaacctggggattggttcaggcctccaccaaaccaggcccg
aacacccaggctttgtacagcttacaggctaaaatagctgcacttccacagctcaagcaa
agccggcacaggtttaatgccttcctgctcggccttctcaatatcaagcgcctagattac
tggctttcccacttacagacgtgccatgatgtcctggaaacatattactggccaacatcc
ttcatgcgcctttcaggctctctttgccaatctttcttcgaagagcttctcctcatgctg
cagccactctccctcctgaccttcaacctcgacctgctgttccagcaccaccacttcgac
ccgttgtcccctgcactcagcccccccagccgtagcccacaatcatccagtccagaccag
ccacagagcaatgggcaacatctgaagaaggtttcaaagcaaggcttcactgatcccaaa
gcagccagccacaattcaagtcccacaagcacattcaaggcaatatcagggatcggtaaa
ggagagacaagtccacagctgcaatggctgcaggagaaggagataatagccccccctagt
atttggagtgggaatagcttcagccagcaggcaggtcaggctcttcagcaaggctggggg
gctgtgatacgtttgggtgagcgtttagggcagaactggagtggtttgacttccactggt
ttgtcagaggaagccaaagctcacaccataacggatctgaatacacactccaattctaat
tgtccaaagaacccaagccaggagcttctgactgctgagggtggaacagcttcttggggt
ttaggcagactatttggagcatccaaaagccccaacgacccaccaagaaaacggcgtcct
tctcactggctaaatcctgggataacagttctgtcccgcatatcaaacacaggccatgcc
tttttgcctgagaagattgagcctggaagaaacgaggagagggagaagggcaaaaatgac
aagagtaaagaaactggtgtccagtcaaaacctgtgagggcggtcagaactctgtgcgat
cacatgggtacaggagcagagctgagcttcagaaagggggaggagctcttactacttgga
ggcgtggaccaagactggattcgctgtcgccaaggtgacaaggagggccttgttcctatt
ggttatgcatcactcatcatgtga
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