Ictalurus punctatus (channel catfish): 108266998
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Entry
108266998 CDS
T04658
Symbol
arhgef7a
Name
(RefSeq) rho guanine nucleotide exchange factor 7a isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108266998 (arhgef7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108266998 (arhgef7a)
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108266998 (arhgef7a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_2
SH3_1
SH3_9
CH
PH
SOS1_NGEF_PH
SH3_3
Motif
Other DBs
NCBI-GeneID:
108266998
NCBI-ProteinID:
XP_017326340
Ensembl:
ENSIPUG00000004171
UniProt:
A0A2D0R943
LinkDB
All DBs
Position
6:complement(32575548..32601222)
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AA seq
802 aa
AA seq
DB search
MNPAEQTVTWLITLGVMESPKKSVSDPAAFLQCALKDGVVLCRLIERLRPGTTEQVFQEP
KNDSECVSNIKEFLKGCTAFRVEPFEASDLLQGQNFNKVLTTLVALNKVTADIGIGSDSV
CTRHSTAHRIKSFESLVSQTSLGRSSKLLHNQFRSLDMTENSNTQLVVKARFNFQQTNED
ELSFTKGDIITVTRMEEGGWWEGNFNGKTGWFPSNYVREVKGCDKQVSPKSGTLKSPPKG
FDTTALSKTYYNLVLQNILETETEYSKELQNLLTNYLRPLQNTEKLSSADITVIMGNLEE
ISTFQQTLVQSLEDCTKLPELQQKVGGFFLNLMPKMRALYTGYCSNHPSAVNILTDHSEE
LGDFMESRGASSPGILTLTTGLSKPFMRLDKYPTLLKELERHMEEGHPDRLEIQKCMTAF
KNLSAQCQEVRKRKELELQILTESVRLWEGEDIKTFGSVIYMSQAMVQNQGCEERNERYL
MLFPHVLLILSASPRMSGFIYQGKLPLSGMTVTPLEDCESHKNAFELSGCMFERLQVICF
NKHDQQDWLEHLNRQTKHTTMTASSMKPLTVPCHTLPSHPLTPSRHAESRGLTVAPAYHT
LPHSSSHGAPHSTVMWGPLEPPKTQKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKSMKK
LLPKRKPERKPSDEEFALRKSTVALEEDAQILKVIEAYCTSAKTRQTLNSRQRRDTAPAL
ILPAEEKIILEEIKSNGQTVIEEKNLMDVVYSLRHEVQELKQDGKKMKRSLEEEQRARKD
LERIVRKVLKNMNDPSWDETNL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgcagaacagacggttacatggctcataacgctcggcgtaatggagtcgccg
aagaagagcgtgtcggacccggccgcgtttctgcagtgcgcgctgaaggacggagtcgtg
ctctgcaggctgatcgagcgcctgcgccccggtaccaccgagcaagttttccaggagccc
aagaacgacagcgagtgtgtgagcaacataaaggagttcctgaaaggctgcactgcgttt
cgtgtcgagccgtttgaggcaagtgacctgctgcaaggccagaacttcaacaaagttctc
accacattggtggcactgaacaaagtgactgcagatattggcattggcagtgattctgta
tgcacccgtcactctaccgctcatcgcatcaagtcctttgaatctctggtctcgcagacc
tcactgggccgatcgtccaagctcctccataaccagttccgaagcctggatatgaccgag
aatagtaacactcagttggtggtgaaagctcgcttcaacttccagcagaccaatgaggat
gagctttccttcaccaagggtgacatcatcacggtcacccgtatggaggaggggggatgg
tgggagggcaacttcaatggaaagactggctggtttccgagcaactatgtcagagaggtc
aaaggttgtgacaaacaagtttcccccaaatctggaacacttaaaagccccccgaaaggt
tttgacaccactgcccttagcaaaacctactacaacctggtgctacagaacattttggaa
acggagacggagtactcaaaagagcttcagaatcttctgaccaactacctgaggccactt
cagaacacagaaaaacttagctctgcagacatcactgtcatcatggggaacctggaggaa
atcagcaccttccaacaaactcttgtccagtcactagaggactgcactaaacttccagag
ctgcaacagaaagttgggggctttttcttaaaccttatgcccaaaatgagagcattgtat
acgggttactgctcaaaccatccatcagctgttaacattctgactgatcacagtgaagag
ctaggagacttcatggagagtagaggagcaagttctccaggcatcctcacactgaccaca
ggccttagcaaaccgttcatgagactagacaaatacccaactttactgaaagaactggag
agacacatggaggagggtcatccagatcggcttgaaattcaaaagtgcatgaccgcattc
aaaaatctttctgcccagtgtcaggaggtgcggaaacggaaggagctggagctgcaaatt
ctcacagaatccgttcgtttgtgggagggtgaagacatcaagacttttggctctgtgatc
tacatgagccaagcaatggtacagaaccaaggctgtgaggaaaggaatgaacgttacctc
atgctgttccctcatgttctgcttatcctctcggccagcccaaggatgagtggcttcatc
taccagggcaagctgcctttgagtggaatgacagtaactcctttagaggactgtgaaagc
cacaaaaatgcttttgagctctccggttgcatgtttgagaggctgcaggttatctgcttt
aataagcacgatcaacaggattggctggagcaccttaaccgtcagaccaaacacaccacc
atgacggcctcaagcatgaagccactcacagtcccttgccacacgctcccatcccaccct
ctaactccatccaggcacgcagagagccgaggcctgaccgtggctcctgcctaccacacg
ctccctcactcctcctctcatggagctccacacagcactgtaatgtgggggcctctggaa
cctcccaaaacccagaaaccttggagtctgagttgcctgaggccagcacccccactcaga
ccatcagctgccctctgctataaagaggatctcagtaaaagccccaaaagtatgaagaag
ctgctgcccaaacggaaacctgaaaggaagccgtctgatgaggagtttgcgttgaggaaa
agtaccgtagcactggaagaggatgctcagatcctgaaagtgattgaggcgtactgtacg
agtgccaaaacccgacagactctcaactcaagacagaggagagacactgctccagcactg
atcctgccggcggaggagaagataatcctggaggagatcaaaagcaacggacagactgtt
atagaagagaagaatctcatggatgttgtttattcactaagacatgaagtccaagaactt
aaacaggacggtaagaaaatgaaacgatctctggaagaggagcagcgagctcgtaaagat
ctggagagaattgtacggaaggttctaaagaatatgaatgacccatcttgggatgagacc
aatttgtga
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