Ictalurus punctatus (channel catfish): 108267001
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Entry
108267001 CDS
T04658
Symbol
tent5c
Name
(RefSeq) terminal nucleotidyltransferase 5C
KO
K23034
terminal nucleotidyltransferase 5C [EC:
2.7.7.19
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108267001 (tent5c)
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108267001 (tent5c)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
108267001 (tent5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTP_transf_7
Motif
Other DBs
NCBI-GeneID:
108267001
NCBI-ProteinID:
XP_017326348
Ensembl:
ENSIPUG00000003310
UniProt:
W5UGC1
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All DBs
Position
6:complement(33028093..33039293)
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AA seq
389 aa
AA seq
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MANMSEASNSSKSESCSVLTWDQVSRLNEVLSEPVPVHGRGNFPTLEVRLKEIVQKVRVR
LEQSGIKVNDVRLNGSTASHVLVKDIGWSYKDLDVIFRVDLPRETEFQLIKDVVLSTLLD
FLPEGVNKEKITHMTLKEAYVQKLVKVYTEQDRWSLISLSNNNGRNVELKFVDSIRRQFE
FSVDSFQIVLDSVLSYYDLSEKPMSQHFHPSVVGESMYGDFAVALDHLRNKVIATKRPEE
IRGGGLLKYCNLLVRDFRPTDEEAFKALERYMCSRFFIDFPDIGEQQRKLEAYLQSHFVG
EEKSKYDYLMILRRVVNESTVCLMGHERRQTLNLISLTAFRVLAEQNVIPDASNVTCYYQ
PAPYVRDLNFSNYYVASCNQSIPTWLPCN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatgtccgaggcgtcaaacagcagcaagagcgagtcgtgcagcgtccttacc
tgggatcaggtgagccggttaaacgaggtgctgagcgagccggtgccggtccacggccgg
ggcaacttccctaccctggaggtgcggctgaaggaaatcgtccagaaggtgcgcgtccgg
ctcgagcagagcggcatcaaagtcaacgacgttcgcttgaacggctccacggccagccac
gtgctggtgaaggacattggctggagctacaaagatctggatgtcatcttcagagtcgat
ctcccccgggagaccgagttccagctcatcaaagatgtggtgctgagcactttgttggac
ttcctgccagaaggggttaacaaggagaagatcacacacatgaccctgaaggaggcctat
gtgcagaaactggtcaaagtgtatacggagcaggaccgctggtctcttatctccctgtcc
aacaataacggacgcaacgtggagctgaagttcgtggactcgatccgcaggcagttcgag
tttagcgtggactccttccagatcgttttggactccgtgctgtcttattacgacctctcg
gaaaagcccatgtctcagcatttccaccctagtgtggtgggcgagagcatgtatggtgac
tttgctgtggctctcgaccacctcaggaacaaggtgattgccaccaaaaggccagaggag
atccgtgggggcggtttgctgaaatattgtaacctcctggtgagagacttcaggcccacg
gacgaggaggcgttcaaagcgttggagcgctacatgtgctctcggttcttcatcgatttt
cctgacatcggcgagcagcagcggaaacttgaggcctacctgcagagtcattttgtcggt
gaggagaaaagcaagtatgactacctcatgattctgcgacgggttgtgaacgagagcacg
gtctgcctcatgggacacgagaggaggcagacgcttaacctcatctctctcacagcgttc
cgggtgctcgccgagcagaacgtcataccagatgcctctaacgtgacctgttattaccag
ccggcaccttatgtccgagacctgaacttcagtaactactatgtggcctcttgtaaccag
tccattccaacatggctgccatgtaactaa
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