Ictalurus punctatus (channel catfish): 108267007
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Entry
108267007 CDS
T04658
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108267007
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108267007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
108267007
NCBI-ProteinID:
XP_017326358
Ensembl:
ENSIPUG00000003123
UniProt:
A0A2D0R6Z4
LinkDB
All DBs
Position
6:complement(33168167..33181956)
Genome browser
AA seq
1154 aa
AA seq
DB search
MERVVCERHGNICFLKTGVKEGPNKGKSFYVCTGRDATPCDFTQATELPPSHCLRHEDVL
VELQTLIHNTTQGSYRLLYRCVVGKKAGQKWCGSVPWTEKSTKTNLLSESEKQPSSLPPV
RNPFKAPGKTDQSSKWKKLQEAETAKAEVKISEKSVESERSRKCSGDEIQSKKTERESDS
QRNSKEGEEMSSARSEPWRDKKLPPGMKVKKRSSDKDKKLHSSSEVTVKGAEDTEGSYSS
SKCESVNKQQKEKGTKIQNPQCHDKEERAAPQHDPKQKTEVRGPDLTSRKTSTSNTDTQP
GNIPKNTPEEESQASPGSTLEGVPASPKPGVSNALKKTVKSPFGDWSDDDDDDVQLVSVQ
PGSQQTSVPAASLQKTLTSYPGFQLTSKGKSQEEDPGALHSQLTAQLKQKKATLSVVNVS
ALPDKGERLKSQVKQLEEALDALSLTSVADTGSQDADSDALENPKSCHSNPFNRAGGSIL
LLEAPVHFQPNSSTSSLGLPLSQGYSQMYGVNPQNQAFYGGKMTEDRLLAVRNVTTEAID
HLHHSLESCPSADTEEQDPKGIKVQLLPHQRRALAWLLWRENQKPCGGILADDMGLGKTL
TMIALILSQKKKDAKDTRLDGWLSKTDSCLVASQGTLIICPASLLHHWKKEIERHVKSSR
LSVYLYHGPNRQRSASILAEHDVVITTYSLVSKEVPVQKEDAEKPSQDSEPVGSALPPLL
RVAWTRVVLDEAHNIKNPKVQTSMAVCKLRAKARWAVTGTPIQNNLLDMYSLLKFLRCSP
FDEYKLWKAQVDNGSKRGGERLNILTRTLLLRRTKDQLDSTGKPLVSLPDRSCKVHRVNL
SEDEQSVYDVVFAQSRSTLQSYLKRHEGGDGKQGDGSNPFEKVAREFGMSQQDSASSSQQ
PQVSSTIHILSLLLRLRQCCCHLSLLKKTLDQSELQGDGIALSLEEQLCALSLSESSNSD
AKATVSLNGSRFRAEIFEESRESTKISAVLTEIKEIRKKNQKSVIVSQWTSMLHIVAVHL
KKLDLRFSVIDGTVNPKRRMDLVDEFNTNPKGPQVMLVSLCAGGVGINLTGGNHLFLIDM
HWNPALEDQACDRIYRVGQSRDVTIHRFVCEGTVEDKISSLQEKKKELAQKVLSGTGSSF
TKLSLADLRVIFGV
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagttgtttgtgaaagacatggcaacatttgctttctgaagactggtgtgaag
gaaggaccgaataagggtaaaagtttctatgtttgcaccgggcgggatgcgacaccatgt
gatttcacccaggctactgaacttccaccttctcactgtctccgccacgaagacgtgctg
gttgaacttcagaccttaattcacaacacaacacagggttcttataggctgttatatcgc
tgcgtagtaggaaagaaagcgggacagaagtggtgtgggagtgtcccatggacagagaaa
agcacaaagacgaatcttttgtcagagagtgaaaagcagccttccagtctgcctcctgtt
agaaatcctttcaaagcccctggcaaaactgaccagagctccaagtggaaaaagcttcaa
gaagcagagacggctaaagctgaggtaaagatatctgaaaagtctgtagaaagcgagcgc
tccaggaaatgcagcggtgatgaaattcagtcaaagaaaacagagagagaatctgacagt
caaagaaactccaaggagggagaggagatgagttctgcacgttctgaaccctggagagac
aaaaaacttcctcctggaatgaaggttaagaagcgatcatctgacaaggacaagaaattg
cacagcagtagtgaggtgactgtaaaaggagcagaagatactgagggttcttatagtagc
agtaaatgtgaaagtgttaataaacagcaaaaagagaaagggactaaaatacagaacccc
caatgccatgacaaggaggagagagcagctccacagcacgaccctaagcagaaaaccgag
gtacgtggtcctgatttaacttctaggaagacatctacctcaaatacagacactcagcca
ggcaatattcctaaaaatactccagaagaagagagtcaggccagcccaggttcaacgtta
gaaggtgttccagcttcgccaaagcctggtgtaagtaatgccctgaagaaaacagtaaaa
tcaccctttggagactggagtgatgatgatgacgatgatgtccagttggtgtcagttcag
ccaggctctcagcagacttcagttccagctgcatctttgcagaaaacccttacctcctac
ccaggcttccagcttacgtcaaagggtaaaagtcaagaagaagaccccggagcactccac
agccagcttacagcgcagcttaaacaaaagaaggctactctgtcagtggttaatgtgtct
gctctgcctgataaaggagagaggctgaagagccaagtgaagcagctggaagaggctctg
gatgctttgagtctgaccagtgttgctgatactgggtctcaagatgcagacagtgatgcc
ctggagaatcccaaatcctgtcattccaatccttttaaccgtgcagggggttctattctc
ctacttgaggctccagtccattttcagccaaattcctctacgagctcattgggactacca
ctcagtcagggatactcccagatgtatggagtgaatcctcaaaaccaggccttctacggt
ggcaagatgacggaggacagactgctcgctgtgcgcaatgtcacaacagaggcgatcgac
cacctgcaccactcactggagtcttgcccttctgcagacacagaggaacaggatcccaaa
ggaataaaggtccagttgttgcctcatcagagaagagccttggcctggctgctgtggaga
gaaaaccaaaaaccctgcgggggtattctggcggatgacatgggtttggggaaaaccctc
accatgatcgctctcattctgtcccaaaagaagaaggacgcgaaagacactcggctagac
ggctggctctccaaaaccgactcgtgtttggtggcatcccagggaactctgatcatctgt
cctgcctctctgctgcatcactggaagaaagagatcgagagacacgtgaagagcagtcgc
ctgagcgtgtatctctaccacgggcctaaccgacaaaggagcgcaagcatactggctgaa
catgatgtggtgatcaccacgtacagcctggtttctaaagaggtcccggttcagaaagag
gatgctgagaagcccagtcaggactccgagcctgtggggtctgctctgcctcctctcttg
cgtgtagcctggactcgtgttgttcttgatgaggcccacaacatcaagaaccctaaagtg
cagacctccatggctgtgtgtaagctgcgcgccaaagcccgctgggccgtcaccggtacc
cccatccagaacaacctgctggatatgtactcgctgctgaaatttttgaggtgctctccg
tttgacgaatacaagctatggaaggctcaggtagacaacgggtctaagagaggaggagag
aggcttaacattctcaccaggaccctgctgctgcgcaggactaaagaccagctggactct
acaggcaagcctctggtgtctctgcctgaccgaagctgtaaagttcacagggtaaatctg
tctgaggatgagcagtctgtttacgatgtggtgtttgcacagtccaggtccaccctccag
tcctatctgaagaggcatgagggaggagacggtaaacaaggagatggtagcaatcccttt
gagaaagttgcgcgagagtttggaatgtcccagcaggactctgcgtcctcctctcagcaa
cctcaggtttccagtaccatccacatcctgtccctgttgctgcgcctcagacagtgttgc
tgccacctgtcgctgctgaagaagacgctggatcagtcggagctgcagggagatgggatt
gctctgtctcttgaagagcagctatgtgctctgtctttgtccgaatcctctaactctgat
gccaaagccaccgtttccctcaacggcagccggttccgcgctgagatttttgaggagagc
cgagagagcaccaagatttcggccgtcctcacagagataaaagaaatccgtaagaaaaat
cagaaaagtgtgattgtgtcccagtggacgagcatgctgcacattgtagctgttcacttg
aagaagctcgacctgcgcttcagtgtcatcgatggtacagtgaaccctaagcgacgcatg
gacctggtggatgaatttaacactaaccctaaaggacctcaggtaatgctcgtgtcctta
tgtgccggaggagtgggtattaatctgacaggtgggaatcatctgttcctcatagacatg
cactggaaccctgcactggaagaccaggcctgtgacagaatctacagagtgggacaaagc
cgtgatgtcaccattcacaggtttgtgtgtgagggaacggtcgaggataagatctcctct
ctgcaagagaagaagaaggagctggcccagaaagttctttctggaactgggtcatctttc
accaagctctcattagcagacctcagggttatctttggtgtataa
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