Ictalurus punctatus (channel catfish): 108267020
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Entry
108267020 CDS
T04658
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00900
Terpenoid backbone biosynthesis
ipu01100
Metabolic pathways
Module
ipu_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108267020
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ipu01006
]
108267020
Enzymes [BR:
ipu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108267020
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
108267020
Prenyltransferases [BR:
ipu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108267020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
108267020
NCBI-ProteinID:
XP_017326386
Ensembl:
ENSIPUG00000008338
UniProt:
A0A2D0R8K0
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All DBs
Position
1:12613276..12621955
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AA seq
354 aa
AA seq
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MGDSSCTKAVHLSDPQFFDKYFEKLLCELTEQDFTDPVLADALSRLREVLRYNATGGKRN
RGLSVIGSLRELVPPSKLPPEEVERALLVGWCIELLQAFFLVADDIMDASLTRRGQPCWY
KKEGIGLDAINDAFLLEGSIYRLLRRHCRRQPYYVHLLELFTETSFQTELGQTLDLMTAP
PNKIDLNRFTMDRYKAIVKYKTAFYSFYLPVAAAMYMAGIDSEVEHNNAKHILLEMGEFF
QIQDDYLDCYGDPAVTGKIGTDIQDNKCSWLVVTALSEMTPEQRVELEACYGRSDAESVE
RVKALYDTLEMPLRYHQYEEESYLRLQDLIQRHAQNLPHAVFLNFAKKIYKRNK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtagctgcactaaagctgtccacttgtcagatccacagttttttgacaaa
tactttgagaagctgctgtgtgagttgacagagcaggatttcacagatccggtacttgct
gatgctctcagcaggctcagagaggtactgcggtacaatgccacaggaggcaagaggaac
cgtggtttgtctgtgattggctcactgcgtgagttggtcccgccctccaagctaccacct
gaagaagtggagcgtgccctgttggtcggatggtgcatcgaactgctgcaagcattcttc
ttggttgcagatgatataatggatgcatctttaacacggagaggtcagccatgctggtat
aagaaggaaggcattggcctggatgctattaatgatgcttttctgctggaagggtccatc
taccgccttctgcgtaggcattgcagaaggcagccctactacgtccatttgttggagctt
tttactgagacatcgttccagacagagctgggccaaaccctcgatctgatgactgctccc
ccaaacaagatcgacttaaaccgttttaccatggacaggtataaagccatagtgaagtac
aagactgcattctactctttttatcttccagtggctgcagccatgtacatggcaggaatt
gacagtgaagtggaacacaacaatgctaaacacatcttgcttgaaatgggggagttcttt
cagattcaggatgattacttggattgctatggtgatcctgcagtaacaggcaagattggc
actgacatccaggacaacaagtgcagctggcttgtggtgacagcactgagtgagatgact
cctgagcagagggtggagctagaggcctgctatggccgaagtgatgctgagagtgtagag
cgagtgaaggcactgtacgacactctggaaatgcctctccgataccaccagtacgaggaa
gagagctacttgcgactccaagacctcatccagaggcacgctcaaaaccttccccatgct
gtttttcttaactttgccaagaaaatctataagagaaacaaatga
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