Ictalurus punctatus (channel catfish): 108267066
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Entry
108267066 CDS
T04658
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108267066 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108267066 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108267066 (shha)
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C46: hedgehog family
108267066 (shha)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Morphogens
108267066 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
DUF7764
Peptidase_M15_3
Intein_splicing
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
108267066
NCBI-ProteinID:
XP_017326486
Ensembl:
ENSIPUG00000011640
UniProt:
A0A2D0R8U5
LinkDB
All DBs
Position
7:11019454..11033063
Genome browser
AA seq
402 aa
AA seq
DB search
MRALSVSLCLALLVLLPVRACGPGRGYGRRKHPKKLTPLAYKQFIPNVAEKTLGASGRYE
GKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGVKLR
VTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAHIHC
SVKAENSVAAKSGGCFPGSAHVRLKDGAMKKVKDLKVGDMVLAADESGNLVYSEFIMFVD
RDDVRRRVFHVIETRNPPTRIALTAAHLLFIVQNSTLTETFASDITPGQEVMILDEGGHS
LRAVMVDRIYEEEHEGSFAPLTGHGTIVVDDILASCYAAVQNQKLAHLSFAPVRLVHKVA
PFLFNRSVQNDGVHWYSDFLYRIGTRILGEAAFHPISMEDKS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgctgtcggtgagtctgtgcctcgcgctgctggtgctgctgccggtgcgcgcg
tgcggtccgggccgcggttacggccggcggaagcacccgaagaagctgactccgctcgcg
tacaagcagttcatccccaacgtggcggagaagacgctgggcgcgagcgggcgctacgag
ggcaagatcacgcgcaactcggagcgcttcaaggagctcacgcccaactacaacccggac
atcatcttcaaggatgaggagaacaccggcgccgaccggctcatgacccagagatgcaaa
gacaagctgaactcgctggcgatctcggtgatgaaccagtggccgggggttaagctgcgc
gtgaccgaaggatgggatgaagacggccaccatttcgaggagtcgcttcactacgagggc
cgagccgtggacatcaccacgtccgaccgagacaagagcaaatacggcacgctgtcgcgc
ttagccgtggaggccggcttcgactgggtgtactacgagtccaaagctcatatccactgc
tccgtgaaagcagagaactctgtggcagcaaagtcgggtggctgttttcccggctcggct
cacgtccgcctgaaggatggagcgatgaagaaagtgaaggacctgaaagtgggagacatg
gtcttggcagcagatgagtctgggaacctcgtctacagtgagtttatcatgtttgtggac
cgtgatgacgtcaggagacgagtgttccacgtcatcgagaccaggaacccgccgacaagg
atcgcgctcaccgccgcgcacctgctgttcatcgtccagaactctacgctgactgagacg
ttcgccagcgacatcacaccgggacaggaagtgatgatactggatgagggaggacacagt
cttcgtgcagtcatggtggatcggatttacgaagaagaacatgagggatccttcgcgccg
ctcacaggtcatggcaccatcgtggtggacgacatcctcgcttcatgttacgctgctgta
cagaaccagaagctggcacacttatcgttcgcgcccgtccgccttgtccacaaggtggca
ccatttttgttcaacagatcagtccagaatgatggtgtgcactggtactctgactttctg
taccgaatcgggacacggattttaggtgaagctgcttttcatccaatcagcatggaggac
aagagctga
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