Ictalurus punctatus (channel catfish): 108267140
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Entry
108267140 CDS
T04658
Symbol
ankib1b
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1 isoform X1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108267140 (ankib1b)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108267140 (ankib1b)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108267140 (ankib1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
Ank_2
IBR_1
Ank_5
Ank
IBR_2
Ank_3
Ank_4
UBA_ARI1
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
108267140
NCBI-ProteinID:
XP_017326610
Ensembl:
ENSIPUG00000009420
UniProt:
A0A2D0R9U9
LinkDB
All DBs
Position
1:complement(13248494..13281963)
Genome browser
AA seq
1098 aa
AA seq
DB search
MGNIATKFRKALINGDEVLAYQLYEGNPQFKESLDPNTSYGEPYQHNTPLHYAARHAMTR
ILRSFLFSKDGNPNKRNVHNETALHVLCMGPHILLAEGTLQPRLARPYEDERRRSDCLQM
ILKWTGAKLDRGEYENADVNATDNKKNTPLHYAAASGMKTCVEFLVKRDADLFAENDNKE
TPCDCAEKQHHKELALSLESQMVFSTDPNAEDIEAEYAALDRREFYEGLRVQDLRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNAEDCCQRSGVQMPTPPPKGYNAW
DTLPSPRTPRTTRSSITSPDEISLSPADDDRSLCGICMCAASMFEEPVDIPCGHEFCRSC
WESFLNMKIQEGEAHNIFCPAYDCFQLVPVEVIESVVSREMDKRYLQFDIKAFVENNPAI
RWCPRAGCERAVRLARQGPGASSSDPLSFSLLQAPAVDCGKGHLFCWECQGEAHEPCDCQ
TWKMWLQKVTDMKPEELAGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAK
CKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQVEEQSKEMTVEAEKKHKSYQELDRFM
HYYTRFKNHEHSYQLEDRLLKTAKDKMEQLSKVLSGREGGAPDTTFIEDAVHELLKTRRI
LKCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIRAACLVQQ
KRQEFLASVARGVAPNDSPEAPRRSFAGGTWDWEYLGFASPEIQGNQAILRGIDPRVHIQ
NAGGQRQEYAEFQYRRRHRQRRRGDMSSLRSNTPDSDEPNPSNLDTDQVGGSQRQGLPMP
HSSLDEDDPNILLAIQLSLQESGMAMSDGGAVDTQELLAHEASLGAIGTSLPSRLDPLLH
DVDVPRAALSSSELLELGDSLKKLGNMSGQNVPQRFNIVGNPSCEPTGSPFPLPSGHADS
AELDSADSANLLGNIMAWFHDMNPQNISLVPSATSSDPEFGAQLGSEQTMEKPFQQWTVE
GEQEDCEYSSTQEREPVRPTQLDLVSVDVPSAIALVPQMSETIGTSQASHHGDTLKCDSD
PEQPSSSSSEWESQVHLV
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggggaatatagcgaccaagtttcgaaaggctctgattaacggagatgaggtgctcgcc
taccagctgtacgagggcaacccgcagtttaaagagtcactggacccaaacacctcatat
ggggagccttatcaacataacaccccactccactatgctgctaggcatgcaatgacacgg
atactcaggtccttcctcttcagcaaggatggcaaccccaacaagcgcaatgtgcacaat
gagactgcgctgcatgtgctgtgcatgggcccacacatcctgctggcagaggggacgctg
cagccgcgcctggcacggccctatgaggatgagaggcgtcgttctgactgcctccagatg
atcctcaagtggaccggtgccaagctggaccgtggcgaatacgagaatgccgacgtcaac
gccactgacaacaagaaaaacacgccactgcactatgccgccgcctcagggatgaagacg
tgtgtggagtttctcgtaaagcgtgacgcagacctgtttgctgagaacgacaataaggag
acaccatgcgactgtgcagagaagcagcatcataaggagttggcactaagtctggagtct
cagatggttttctcaacagaccccaatgctgaggacatcgaggctgagtacgctgcactt
gaccgcagggagttttacgagggcttgcgggtccaagacctgaggaggctgaaggacatg
ttgatagtggagaccgcagacatgctgcaggctcctctcttcactgcagaggctctcctc
agggcacatgactgggacagagagaagcttctagaggcgtggatgtccaatgctgaggac
tgctgtcagcgctctggggttcagatgcccactcctccacccaaaggctacaatgcctgg
gatacactaccctcaccacgaacgccacgcaccacccgctcctcaattacgtcacctgac
gaaattagcctctcgcccgctgatgacgaccgctccctgtgtggtatatgtatgtgtgct
gcctccatgtttgaagagcctgttgatatcccgtgtgggcatgagttctgcagatcatgc
tgggaaagctttttgaatatgaagatacaggagggagaagctcataacatcttctgccca
gcctatgactgcttccagctggttcctgtggaggttatagaaagtgttgtgtccagggag
atggacaagcggtacctgcagtttgacattaaggcctttgtggagaacaacccagccatc
cggtggtgcccgcgggcaggctgtgagagagcggtacgcttggcgaggcaggggcctggt
gccagctcctctgacccgctcagcttttctctgctccaggccccggctgtggactgcgga
aaaggccatctcttctgctgggagtgccagggggaggctcatgaaccctgtgactgccaa
acatggaaaatgtggctgcagaaggtcactgacatgaagccagaagaactggcaggtgtg
agtgaggcgtatgaagatgctgccaactgtctgtggttactcaccaactccaaaccctgc
gccaactgcaagtctcccattcagaagaatgaaggctgcaaccacatgcagtgtgccaag
tgtaagtatgatttttgctggatctgtctagaggagtggaagaagcacagctcttctaca
ggaggctattaccgctgcactcgctatgaggtcattcaacaggtggaagagcagtctaaa
gaaatgaccgtggaggctgagaagaagcacaagagctaccaggaactcgatcgctttatg
cactactacacacgcttcaaaaatcatgagcacagctaccagctggaagaccgtctcctc
aaaacggccaaagacaagatggagcagctgagcaaagtcctgagtggaagggaaggaggt
gctccagacactactttcattgaagatgcagtccatgaacttcttaagactcgccgtatc
ctcaagtgctcttacccttatggtttctttctggagcccaaaagcaccaagaaagagatc
tttgaacttatgcagactgatctggagatggtaacggaggatcttgcccagaaagtgaac
aggccctacctccgtacccctcgccataagataatccgtgcagcctgcctggtgcaacag
aagaggcaggagttcctcgcctctgtggctcgaggcgtggcacccaacgactccccagaa
gccccacgacgcagttttgctgggggcacatgggactgggagtacctgggtttcgcatct
ccagagatccaggggaatcaggcaattctcagaggaattgatccgagagtccacattcaa
aatgcaggaggccagcggcaggagtatgcagagttccagtacagacgcagacacagacag
cgcaggcgtggagacatgtctagccttcgcagcaacaccccagactctgacgagcccaac
cccagcaatttagatacagatcaagttggtggtagtcagaggcaaggattacctatgccc
catagctccttggatgaagatgatcctaacatcctgctggccatccagctctctctacag
gagtctgggatggccatgagtgatggaggtgctgtagacacacaggagctgctggctcac
gaagcatctctgggggccatcggcacttctctgccctccagactggacccattgctccat
gatgtcgatgttcctcgtgctgcactgagcagttctgagctcctggagctcggagacagt
ctaaagaagctgggtaacatgagtggccagaacgtcccgcaacgctttaacattgttggc
aatcccagctgcgagcccactggaagcccttttccacttccctccggacatgcggactcc
gctgaattagactccgctgacagtgctaatctcctgggcaacatcatggcctggttccat
gacatgaaccctcagaacatcagtctggttccttcagccacttcttcagatccagagttt
ggcgctcagctcggctccgagcaaacgatggaaaagcccttccagcagtggacagtagag
ggcgagcaagaggattgtgagtacagcagcacgcaagagagggagcctgtcagacccact
cagctggacctggtgagtgtagacgtgccgtctgcaatcgctcttgtgccccagatgagt
gaaaccattggcacctctcaggcgagccaccacggcgacaccctgaaatgtgactcggac
cctgaacagccaagcagcagctcttctgagtgggagagtcaagtgcatcttgtatga
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integrated database retrieval system
