Ictalurus punctatus (channel catfish): 108267158
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Entry
108267158 CDS
T04658
Symbol
zgc:162171
Name
(RefSeq) ras-related protein Rab-38
KO
K07918
Ras-related protein Rab-32
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108267158 (zgc:162171)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ipu04031
]
108267158 (zgc:162171)
Membrane trafficking [BR:
ipu04131
]
Others
Specific organelles associated proteins
Melanosome
108267158 (zgc:162171)
Mitochondrion
108267158 (zgc:162171)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab29/32/38 [OT]
108267158 (zgc:162171)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
AAA_7
AAA_16
MMR_HSR1
TniB
AAA_22
nSTAND3
TsaE
PspAA
cobW
Motif
Other DBs
NCBI-GeneID:
108267158
NCBI-ProteinID:
XP_017326634
Ensembl:
ENSIPUG00000020836
UniProt:
A0A2D0R7R9
LinkDB
All DBs
Position
7:complement(23808282..23813852)
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AA seq
224 aa
AA seq
DB search
MQRERLLKVLVVGDLGVGKTAIIRRYVHQVFSHHYRATIGVDFALKLLHWDPSTVIRLQL
WDIAGQERYGNMTRVYYREAVGALVVFDMTRASTFQAVLKWKGDLDAKVALCNGHPVPAV
LLANKCDQQSHGMCAKLPKMESFYKEQGFLGWYETSAKDNTNIDKAIMRLVEHIMASDGE
KPAVDSDPSRVILPTSNNNLHERRQSSCSACSRPDTLPKEHEQF
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggagcgcttgttaaaggtgttagttgtaggggatctgggtgtagggaagacg
gccatcatcaggcgctacgtgcaccaggttttctctcatcattaccgagccaccatcgga
gtggacttcgcgctcaaattgctgcactgggacccgagcaccgtcatccgcctccagctg
tgggacatcgccggacaggagcgatatggcaacatgactcgtgtgtattaccgtgaagca
gtaggggcactggtggtcttcgacatgacccgagcatccactttccaagctgtacttaaa
tggaaaggtgacctggatgctaaagtggccctctgtaatggtcacccggtgccagctgtc
ctgttggcgaataagtgtgaccagcagtcacatggcatgtgtgccaaactacccaagatg
gagagtttttataaagagcaaggattcctgggctggtatgagacatcggccaaggataac
acaaatattgacaaagccatcatgcgcctggttgagcacatcatggcaagtgatggcgag
aaacctgcagttgactcagaccccagtcgggtgatcctgccaacatcgaacaacaacctc
cacgaacgcaggcaatccagctgttcagcctgttccagaccggacacacttcccaaagag
catgagcaattctag
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integrated database retrieval system
