Ictalurus punctatus (channel catfish): 108267164
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Entry
108267164 CDS
T04658
Symbol
vgf
Name
(RefSeq) neurosecretory protein VGF
KO
K25695
neurosecretory protein VGF
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108267164 (vgf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108267164 (vgf)
Cytokines and neuropeptides [BR:
ipu04052
]
Neuropeptides
GPCR binding
108267164 (vgf)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF5847
Motif
Other DBs
NCBI-GeneID:
108267164
NCBI-ProteinID:
XP_017326639
UniProt:
A0A2D0R7S4
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Position
7:complement(16865819..16871788)
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AA seq
647 aa
AA seq
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MVMIRCQQVSRAPVVLFFFLFSLKFEPTSSIPVTGHKVGNRYEPSSPARTLPQIQFTQTG
GVPETLNEEEDELFKDVDPKTLAAVLLEALNKPQEVMREQDKKGGEKNKAEEDRETQSFD
RESNGYQELELVRAAAEAQGREEREREQDEERKREEEEEERLTEKVTSRTTSQTVPVKEQ
EVVAKEVASKQEQQETEGATDGNKDEQLSPEELKNLETMLEEFQSYTTAMKRERDSSSGQ
RESRGDYFDYLDRNGLMNNEIKPKPKGYDLALSKKKLKWQQEQEKNSNRPLGGNFMDDFN
DNIEDQEQENGEDEDELLSPEEEEARAKAEQEEVRRQAAEAQRAKAEEEKLADIASDMIL
QYMVKQDGKKYRGNNAAEDKRSEEDGANDDDDIDPQTIDKLIEISSKLHLPADDVVDIIS
DVEKKKKKDAPETLQWQRPLVPPPAPDVSSTVLRTSPPSKPPKPNTNLLKSWFKDRAPIK
PNQQNFWIKQQWPFWTYPSYRRYQKPYSSYYTIYIPPPKAKPRYYAKPSYSLNDILGNSL
DYEFDYPLKQRYNPWTQSRPRAPLAFQRNLYIPNYIVPQPRTFKAIPMPKPRSPLRHRPA
FYYSPTASVIAPQDGYYSQVEQPQPDSNEELGNFIEKVFLKRPRMFQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgattcggtgccaacaagtatcaagagccccagttgtgcttttcttcttcttg
ttcagtcttaaatttgagcccacaagcagcatccctgtgactggacacaaagtgggcaat
cgatatgaaccctcctctcctgcacgtacactgcctcagattcagttcacccaaaccgga
ggtgttccagagacactgaatgaagaggaggatgaacttttcaaagatgttgacccaaaa
accctagcagcagtcctcctagaagccctcaacaagcctcaggaggtaatgagagaacaa
gataagaaagggggagagaaaaacaaggcagaagaggacagagagactcagagttttgac
agagagagtaatggatatcaggagctggaactggtgcgagcagctgctgaagcacagggc
agagaagagagagaaagggaacaggatgaggagaggaagagggaggaggaagaagaagaa
cgcctcacggaaaaggtgaccagtcgtaccacaagtcaaacagtgcctgtaaaagaacag
gaagtagttgcaaaggaggttgcaagcaagcaagaacagcaagaaacagagggagccact
gatgggaacaaggatgagcagctgagtccagaagagttgaagaacctggaaaccatgtta
gaggagtttcagagctacactacagccatgaaaagagaacgtgattcctcatctggccag
agagagagtcgtggtgattactttgactatctggatcgtaatggcctcatgaacaatgag
atcaagcccaaacctaagggttatgacttggctttgtctaagaagaagcttaagtggcaa
caagagcaggaaaagaacagtaatcggccattgggaggaaactttatggatgattttaat
gataatattgaagaccaagaacaggaaaatggagaggatgaagatgaactgctgagtcca
gaagaagaagaagctagggctaaagctgaacaggaagaggtgcgcagacaagcagctgag
gcccagagagccaaggcagaagaagagaagcttgcagatattgcatcagatatgatcttg
caatacatggtcaagcaagatggtaaaaagtaccggggcaataatgctgcagaagataaa
cgctcagaggaagatggtgctaatgatgatgatgatattgacccccaaacaattgacaag
ttgatagagatctccagtaagctccacctgcctgctgatgatgtggtagatataatcagt
gatgtggaaaagaagaaaaaaaaagacgctcctgaaactctgcaatggcaacgacctctt
gtacctcctccagcacctgatgtctcatctacagtcttaagaacatcaccaccctcaaaa
ccacccaagcctaacacaaatctgctgaaatcatggttcaaggacagggctcctattaag
cccaatcaacaaaatttttggatcaagcaacagtggcccttttggacctacccctcctat
cggcgctatcaaaagccctacagtagttattacaccatctacatcccacctcctaaagct
aaaccacgctattatgccaaaccctcctactcccttaatgacattctggggaattcattg
gactatgagtttgattaccctctgaaacaaaggtataatccctggacacaaagtcgtcca
agggctcctctggctttccagcggaacctctacatccctaactatattgtccctcaaccc
cggactttcaaagccatacccatgcccaaaccccggtcacccctgcgtcatcggcctgct
ttctattactcacccacagcttctgtaattgccccacaggatggctattatagccaggtg
gaacagccacaaccagacagcaatgaggagctagggaacttcattgagaaggttttcctg
aaacgtccccgcatgtttcagtga
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