Ictalurus punctatus (channel catfish): 108267171
Help
Entry
108267171 CDS
T04658
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108267171 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108267171 (chrnb1)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108267171 (chrnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
108267171
NCBI-ProteinID:
XP_017326647
Ensembl:
ENSIPUG00000023026
UniProt:
A0A2D0R7T1
LinkDB
All DBs
Position
7:22987562..23013578
Genome browser
AA seq
494 aa
AA seq
DB search
MKAWEWLVFICCLFSLCVIGETTDAQNKLLKQLFSSYNVKVRPSKTPESKVVVRIGMTLS
SFVSLNMKDEEMNTIVIMNLEWNDHRLSWNPKDHDGIDILRIPAAKMWLPDIVLINNNDG
VFEVALRVHVQVYSNGRVTWTPPALFRSSCAVKVTYFPFDWQNCTMVFKSFTYDSSEMDL
QYALDEKGNEIREIIYDTGFSESGEWHIRHKPSRKNVKKDDLYEDITFYLIIERKPMYYV
FNIILPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKVPETSLGVPIIV
NYLMFTMILVTCSVILSVVVLNLHHRSPSTHHMPLLVRKIFIHMLPPYLGLLRPKVETPL
SLEHPHKKENHKSISRAADEYFIRKPNTCVLFPKPNRYQPDGLCTDLRKFIEGPSHYLTL
PPELKSAVEAICYIAGQLQAEKDYEALKEDWQYVAMVVDRLFLWIFVIFTTVGTLVIFAY
ASFNATPTDPFISA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcctgggaatggctcgtgtttatctgctgccttttcagtctgtgcgtaattgga
gagaccacagatgcacagaataagctactgaagcagcttttctcctcttacaatgtcaaa
gtgcggccatcgaaaacaccagagagcaaagtagttgtgaggattggcatgaccctgtca
tctttcgtcagtctgaacatgaaagatgaagagatgaacaccatcgttatcatgaacctg
gagtggaacgatcaccgtttgtcttggaatcccaaagaccatgatggcattgacatactg
cgaattcccgcagcaaaaatgtggctcccagacatcgttctaattaacaataacgatggt
gtgtttgaagtggctctacgcgttcatgttcaggtatacagtaatggcagagtgacatgg
acccctcctgcccttttccgcagctcttgtgctgtaaaggtgacatactttccatttgac
tggcagaactgcaccatggtgttcaagtcattcacttatgactcctctgaaatggatctt
cagtatgcccttgacgagaaaggcaacgagatacgagagatcatctatgacactggtttc
agtgagagcggtgaatggcatattcgtcacaagccttccaggaagaatgtaaagaaagat
gatctatatgaagacatcaccttctacctgatcatcgagcgcaaacccatgtactatgta
ttcaacatcatcctgccctgcatcctcattacgatcattgccatcttcaacttctacctg
ccacccgatgctggagagaagatgggtttgtccatcaacgtgctgctgacccttactgtc
tttctgctcctgcttgctgataaagtccccgagacatctctgggtgtccccatcatcgtc
aactacctaatgttcaccatgatcctggtgacgtgttctgttattctcagtgtggtggtg
ttgaatctgcaccaccgctcaccaagcacccaccatatgcccttgttggtgcgcaagatt
ttcatccacatgctgcccccgtatctgggtctcctaaggccgaaagtggagacaccgcta
tctctggagcacccacacaagaaggagaaccacaaaagcatcagccgggcagcagacgaa
tacttcatccgcaagcccaacacctgtgtgctctttcctaagcccaacaggtaccagcca
gacggcctgtgcactgacctgcggaagttcatcgaaggccccagtcactacctgactctg
ccccctgagctgaaatcggccgtggaggcaatctgctacatcgctgggcagctacaagct
gagaaagactatgaagctttaaaggaagactggcagtatgtggccatggtggtcgatcga
ctcttcctctggatctttgttatcttcaccactgttggaacattggtcatttttgcgtac
gcaagttttaatgctactcccactgaccccttcataagtgcttga
DBGET
integrated database retrieval system
