KEGG   Ictalurus punctatus (channel catfish): 108267277
Entry
108267277         CDS       T04658                                 
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04141  Protein processing in endoplasmic reticulum
ipu04210  Apoptosis
ipu04217  Necroptosis
ipu04218  Cellular senescence
ipu04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108267277 (capn1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    108267277 (capn1)
   04217 Necroptosis
    108267277 (capn1)
   04218 Cellular senescence
    108267277 (capn1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    108267277 (capn1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ipu01002]
    108267277 (capn1)
Enzymes [BR:ipu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     108267277 (capn1)
Peptidases and inhibitors [BR:ipu01002]
 Cysteine peptidases
  Family C2: calpain family
   108267277 (capn1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 EF-hand_5 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 108267277
NCBI-ProteinID: NP_001316199
Ensembl: ENSIPUG00000009909
UniProt: M1FSS0
LinkDB
Position
7:25986182..26010449
AA seq 704 aa
MEPIYATGVAAKLRSQWDRNEGLGQNYNAVKFLGQDYEMLRAQCLQSRTLFEDSYFPATA
SSLGFNELGPRSSKTSGVRWMRPPEICSRPQFITQGATRTDICQGALGDCWLLAAIASLT
LNDNLLHRVVPHGQSFSEGYAGIFHFQFWQFGEWVDVVIDDRLPFKDGKLLFVHSAEGGE
FWSALVEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYELSKPPADLYTIIKRAVERG
SLLGCSIDISNTRDMEAVTFKKLVKGHAYSVTGVEEVNFRGTPTKLVRIRNPWGEVEWTG
AWSDNAREWDSVDPSTRSKLNNRSEDGEFWMSFQDFLREYSRLEICNLTADALEASQIKK
WSTSLYQGEWRRGSTAGGCRNYPATFWINPQFKINLKIPDSAGKNDCTFLVALMQKDRRK
QRKEGKDMETIGFAVYEVPSEFVGQPAVHLKRDYFITHGSSARSETFINLREVSSRLRLP
VGEYIIVPSTFEPQKEANFVLRVFSEKPADSVELDDEVKADLPKVNYLAESQIDAGFKGL
FRQLAGADMEISVTELQTILNRIISKHKDLKTDGFTQEACRSMINLMDVDGSGKLGLTEF
HVLWEKIKQYLEVFRKFDVDKSGTMSSYELRMALESAGIKLNNHIFQLIILRYAEQDLTV
DFDNFVCCLVRLETMFKTFYTLDTDTDGIISLDFNQWLSLTMFV
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggagcccatttacgctacgggagtggcagccaagctgcgcagtcagtgggaccgaaat
gaaggcttgggccagaactataatgctgtcaagtttttggggcaggactacgagatgctt
agggcgcagtgcctccagagcaggaccttgtttgaggactcctacttccctgccactgcc
tcttctctgggctttaatgagctcggaccccgctcctccaaaacgagtggtgtacgctgg
atgaggccaccggagatctgctctcgtccccagttcatcacgcaaggagccacacgcaca
gatatctgtcagggagcactgggtgattgttggctgctggctgctattgcatctctcact
cttaatgataatctgctgcaccgtgtggttccacatggacagagtttcagcgagggctat
gctggtatctttcacttccagttctggcagtttggtgagtgggttgatgtggtgattgac
gacaggctgccgtttaaagacgggaagctgctgttcgtgcactcggcggagggcggcgag
ttctggagcgctctggtggaaaaggcctacgccaagctgaacggctgctacgaggccttg
tcaggcggcagtacgtcagaaggctttgaggacttcacgggtggtgtgacggagatgtac
gagctgagcaaacctcccgctgatctttacaccatcataaagagggccgtggagagagga
tctctgctgggctgctccatagatatcagcaatactcgtgacatggaggccgtcaccttc
aagaaactggttaaaggccacgcctactctgtgacaggagtggaagaggtgaatttcaga
ggaacccccaccaagctggttcgcatcagaaacccctggggagaggtggagtggactgga
gcttggagcgataatgctagagagtgggacagtgtggacccgtccaccaggagcaaactg
aataaccgcagcgaggacggagagttctggatgtcgttccaggacttcctgcgagagtac
agtaggttggagatctgtaacctgacagcggatgctctggaagccagtcagataaagaag
tggagcacatcactctaccagggcgagtggaggagaggtagcacggctggaggctgcagg
aactacccagctacattttggatcaaccctcagttcaagatcaacctgaagatcccggat
tcggcaggaaagaacgactgcaccttcctggtggctctgatgcagaaagaccgcaggaaa
cagcgcaaagagggcaaagatatggagaccatcggcttcgcagtgtacgaggttcccagt
gagtttgtaggtcagccagcagttcacctgaagcgagattatttcatcacacacggctcc
agcgctcgctctgagaccttcatcaacctgcgtgaggtcagctcacgcctccgcctacct
gttggagagtacatcattgtcccgtccacgtttgagccacagaaagaagccaactttgtg
ctgcgtgtcttctctgaaaaacccgctgactctgtggaattggatgacgaagtcaaagct
gatcttcccaaagtgaattatttggctgagagccaaattgatgctggattcaagggtctg
ttcagacagctggcaggagcggacatggagatcagtgttacagagctccagaccattctg
aacagaatcatcagcaagcataaggatctgaagacagacggctttacccaggaggcgtgc
cgcagtatgatcaacctcatggacgtagatggcagtggtaagctgggtctcacagagttc
cacgtgctgtgggagaaaatcaaacagtatctggaagtgttcaggaagtttgatgtggac
aagtctggcacaatgagctcatatgaactgcgtatggccctcgaatcagcaggcatcaag
ctgaacaaccatatattccagctgattattctgcgctacgcagagcaggacctgaccgtt
gactttgacaacttcgtctgctgtctagtgcgtctggagaccatgttcaagacattttac
actttagacaccgacactgatggaatcatctccctagacttcaaccagtggctatcactg
actatgtttgtgtaa

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