Ictalurus punctatus (channel catfish): 108267314
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Entry
108267314 CDS
T04658
Name
(RefSeq) cadherin-2
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108267314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108267314
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108267314
04090 CD molecules [BR:
ipu04090
]
108267314
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108267314
Cell adhesion molecules [BR:
ipu04515
]
Cadherins
Major cadherins
108267314
CD molecules [BR:
ipu04090
]
Proteins
108267314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
DUF5385
Motif
Other DBs
NCBI-GeneID:
108267314
NCBI-ProteinID:
XP_017326818
Ensembl:
ENSIPUG00000011722
UniProt:
A0A2D0R8A2
LinkDB
All DBs
Position
7:complement(28360256..28463485)
Genome browser
AA seq
908 aa
AA seq
DB search
MELSLGRGSLLLFLLTALQTGTDGRSSIPCRPGFSEDVYDAPMPETLLEGQPLLTVRFHD
CGRGGRVHFECSQPTGFRIEITGEALALWKLQPSLSSSSSFSSSPLLVIARDVSTHEQWQ
TQIRLGPSGGHESQEALESRRLPEIIIPSQQVNSQIKRMKRDWVIPPINVPENSRGPFPQ
ELVRIRSDHDNKVNLRYSVTGPGADQPPTGIFSIDPISGELSVLKPLDREHIASFHLRAH
AVDLNGNQVENPIDIVINVIDMNDNRPEFVHQIWNGTVPEGSRPGTSVMTVTSEDKDDPR
TQNGMLRYKILSQNPDSPSANMFTINNRTGSIITVAAGLDREKVPQYTLIIQATDMEGNP
MYGLSNTATAVIRVTDVNDNPPEFTTDAFYGEVPENRVNVIVANLTVTDKDQPNTPAWNA
VYKITSGDPTGRFSVPTDPTTNEGLVTVVKPIDYETTRTFVLTVVVMNEIPLERGIHLPR
QSTATVSVRVIDVNESPYFEPNPRLIRLDEGMPAESALTTFVAQDPDRFMQQIIRYSKLS
DPADWLRIDPNNGRITTIAVLDRESPYVQNNLYNATFLATDNGIPPASGTGTLQILLRDI
NDNAPQVFPHEVEMCEKPETNSINITALDGDLNPNAGPFAFELPPRPSDIRRNWTLTRIN
GDHAQLNLRIGFLERGIYEIPIHITDSGNLPMSNTSYLRVKVCQCDQNGDCTDQEFLVAA
GLGTGAIIAILLCIIILLILVLLFVMWMKRKDKERQAKQLLIDPEDDVRDNILKYDEEGG
GEEDQDYDLSQLQQPDTMDPECVKPVGIRRLDERPLHPEPQYPVRSAAPHPGDIGDFINE
GLKAADGDPTAPPYDSLLVFDYEGSGSTAGSLSSISSSSSGGDQDYDYLNDWGPRFRKLA
DMYGGSDE
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggagctaagcttaggccggggctcgcttctcctcttcctcctgacagcactccagact
ggcacggacggcagaagctccataccatgcaggcctggtttttctgaagacgtatacgac
gcaccgatgcctgaaaccctactggagggacagccgcttctcaccgtgaggttccatgac
tgtggacgaggaggacgagtgcactttgagtgcagccagccgacaggtttccgcatcgag
atcaccggggaggcgttggctctctggaaactccagccgtctttatcctcctcatcctcc
ttctcttcttctccgctgcttgttatagcgcgagatgtctccacacacgagcagtggcaa
acccagatccggctcgggccgtcaggaggccacgagtcacaggaggcgctcgagtccagg
agactgccggagattataatcccctcgcagcaggtgaacagccagatcaaacgcatgaag
agggactgggtaattcctcctattaacgtcccggagaactccagaggaccttttccacag
gagctggtcaggatccgctcggaccacgataacaaggtgaacctacgctacagcgtgacc
ggccccggagctgaccaaccgcccaccggcatcttctccatcgaccccatctcaggagaa
ctgagcgtgctcaaaccactcgaccgcgagcacatcgccagcttccacctgagagcgcat
gcagtggatctgaacggcaatcaagtggaaaaccctattgacattgtgatcaacgtgatc
gacatgaacgacaaccgaccggagtttgttcatcagatctggaatgggactgtaccagag
ggctccaggccaggcacgtctgtaatgacagtaacatccgaggataaggacgacccgcgc
acgcagaacggcatgctgcgctataagatcctgtcccagaaccccgatagcccgagtgcc
aacatgttcaccatcaacaaccgcactggcagcatcatcaccgtggcggccgggctggac
cgagagaaagttcctcagtacacgctgatcatccaggccacggatatggaagggaacccg
atgtacggcctttccaacactgccacggccgtcatcagagtgactgacgtcaacgacaat
ccaccggaattcaccaccgacgctttctacggtgaggtgccggaaaatcgtgtgaacgtg
attgtggccaatctgacggtgacggataaagaccagcccaatacgccagcatggaacgca
gtgtataagatcacaagtggagatccgactggccgcttctccgtccccactgaccccacc
accaacgagggactggtcaccgttgtcaagcccatcgactacgagacaacccggacgttt
gtgctcactgtagtggtgatgaacgagatcccactagagcgaggcatccaccttccccgc
cagtccaccgccaccgtctctgtccgtgttatcgacgtcaacgagagcccttacttcgag
cccaatcccaggctcatcaggctggatgagggcatgccggccgagtcggctctcaccacg
ttcgtagcccaggatccggaccgtttcatgcagcagatcatcagatactcgaaactctca
gacccagctgattggctgagaatcgacccaaacaacggacgcatcaccaccatcgctgtt
ctggaccgagagtctccgtatgttcagaataacctgtataacgctacgttcctcgccacc
gataacggcattcctccagccagtgggacgggcaccctgcagatcctgctgcgcgacatt
aatgataacgctcctcaggtgttccctcacgaggtcgagatgtgcgagaaacccgaaact
aacagcatcaacatcacggcgctggacggagacctgaaccccaacgccggacccttcgcc
ttcgagctgcctccacggcccagtgacatcaggaggaactggactctcacacgcatcaat
ggtgaccacgcccagctgaacctgaggatcggcttcctagagagaggcatctacgaaatc
ccgatccacatcaccgactccggcaacctgcccatgtccaacacgtcctacctgcgcgtc
aaggtgtgtcagtgtgatcaaaacggagactgtactgatcaggagttcctcgtggctgcc
ggactgggcaccggcgccatcatcgccatcctgctctgcatcatcatccttctcatcctg
gtcctgttgtttgtgatgtggatgaagaggaaggataaagagcgtcaggccaaacagttg
ctgattgaccccgaggatgacgtccgagacaacatccttaaatacgacgaggaaggaggt
ggcgaggaggaccaggattatgatctgagtcagctgcagcagccggacactatggatccg
gagtgtgtgaagcccgtcgggatccgcagactggacgagagaccgcttcacccggagcct
cagtacccggtcagatcggctgctccacaccccggagatatcggagacttcatcaatgag
ggtctgaaagcggccgacggcgacccgacggctccaccgtacgactcgctgctggtgttc
gactacgagggcagcggctcgacggccggctcgctcagctccatcagctcgtccagcagc
ggcggagaccaggactacgattatctcaacgactggggaccgcgattccgcaaactcgcc
gacatgtacggaggctcggacgagtga
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