KEGG   Ictalurus punctatus (channel catfish): 108267337
Entry
108267337         CDS       T04658                                 
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
  KO
K06246  laminin, gamma 2
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04382  Cornified envelope formation
ipu04510  Focal adhesion
ipu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108267337 (lamc2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108267337 (lamc2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    108267337 (lamc2)
SSDB
Motif
Pfam: EGF_laminin Laminin_B EGF_LMN_ATRN Lysozyme_like
Other DBs
NCBI-GeneID: 108267337
NCBI-ProteinID: XP_017326854
Ensembl: ENSIPUG00000016890
UniProt: W5UL58
LinkDB
Position
7:253706..267561
AA seq 1114 aa
MKSAWICLCAICVWYPVQGTYLSSRCACNGKALYCVRDSLGLRCANCQDNTDGRHCESCK
EGFYHQRAGESCLPCYCNPTGSEGSGCNSQGQCVCKRGVQGAQCDRCANGSPITATGCEP
LQQKTCFCNGHSNECSPAQGYSVYNIISTFDQGTEGWRVVTAPSVSPSQVQFRWSPTHHS
VEVISADVMPVYLSAPAQYLGNQALSYGQTLSFVLRLNRGVRYPSTSDVVLEGAGLKVSA
PLGNMRTVISCGKKITYTFRLDEQPSSRWNPQLSVLEFQTLLSNLTAIKIRVTFGEGGNG
YLDDVVLVSARLGPGLPASWVEKCRCPTGYEGRFCERCATGYKRRFPGQGVRSQCEPCAC
RGGSCDPETGDCYSADETPSGQACGTGYYSDPEIPGACKKCPCPMGYICSLTAGTLNVNC
RCPPGTTGSRCQKCSDGFYGDPLGESGVQRPCQSCQCNGHLDLNAVGNCDRLTGECFKCM
NNTTGFQCEKCLEGFFHSKAGDACRACNCNPKGSIASSCSEQGQCKCKEGFEGQKCVGST
CPSCFNPVKSQIGKYVKKLQQVEALFNEVGTGGVDITRAMEKAISTAEEMVKTVESEAES
LIEAEKSLHAQLVAIGNDQLKDEGKIQDILQIVESVVRQERQYQTEVADIQKLISDIRQN
LQKAKQDIQSIELPSSDAVPGTNIASDLVQKASDLAEKHMGEAATVERTAKSSLLEAEKA
LALMRTVISGENKVTEQLNGLRTQYETDIAQVNAMNRQASRLSKAAETESTVALDTLKQI
SDLEKNLPKAPKKDITSLVATLDGLKNSFGSNVSGFLELHNQAGDDQREAVELMKQLKNA
EQVQENLLARATIAKADADKALKLFNNLGSVDQALEKLKGFEAQLNSSKALADDALSKLP
IISGIIGKAMVNNDKTQAILDQLGDFSDALGTLDKLNISLAKVEKISGSLPSSSDLLKTA
TALKGGLEVLNNQAVSTMNKLTEEKTNAERERELAEEVNWEASGAYINANNTRGAVGDAL
KTVNNLLGLIGTPGAVDEKKVTDLENAIATSRRRVETELRPRLRELEDKEAEQRAAITRM
INDIDTILADIDNLEHINRTIPTSCYNTPPIERA
NT seq 3345 nt   +upstreamnt  +downstreamnt
atgaagagcgcttggatctgtttgtgcgcaatctgcgtctggtatccagttcaaggaaca
tatctgtcctcgagatgtgcatgtaatggaaaggctctgtactgcgtgcgggactccctg
ggcctgcgctgtgcgaactgccaagacaacactgatggccggcactgtgagagctgtaag
gaaggattctaccaccagagagcaggagagagctgcttgccctgctactgcaaccccaca
ggctctgagggctcaggatgtaacagtcaggggcagtgtgtgtgtaagcgaggtgtgcag
ggggcccagtgcgatcgctgcgctaacggatctccaatcacagccaccggctgtgagcca
ctgcagcagaaaacctgtttctgtaacggtcattcaaacgagtgctctccagcacaaggt
tactcggtttacaacatcatctcaacatttgatcaagggacggagggctggcgagtcgtc
actgctccgagtgtaagtccatcccaggtgcaattccgctggtctccaacacaccacagc
gtcgaggtcatctctgcagacgtgatgcctgtttacctgtctgctccagctcagtatctg
gggaaccaggctctgagctacggtcagacactgtccttcgtactgcgtctgaaccgggga
gtccgttatccttctacctcagatgtcgtgttagaaggtgctggactaaaggtttctgct
ccgctgggaaacatgaggactgtcatctcctgtggcaagaaaatcacctacactttcagg
ctggatgaacaacccagcagcagatggaatccccagctctcagtgctggaatttcaaacc
cttttgagtaaccttacggccatcaagatccgagtcacgtttggggaagggggaaatggt
tatctggacgacgtggttctggtctcggctcggttgggtcctggcctccctgcatcctgg
gtagagaagtgccgttgtccgacaggttacgaaggacggttctgtgagcgctgcgctaca
ggctataaaagacgtttccctggtcagggtgtccgtagccagtgtgagccatgtgcctgt
cggggaggaagctgtgatcctgaaacaggggactgctactcagctgatgagacacccagt
ggacaagcctgtggtactggttactacagcgaccctgagattcctggagcctgcaagaag
tgcccatgccccatgggctacatctgctcgctcactgcagggacactgaacgtaaactgc
agatgcccacctgggacaacaggctctcggtgccaaaagtgcagcgatggattctatggc
gatcctctgggagagagtggcgttcagcgaccctgccagagctgccaatgtaacggacac
ttggacttaaatgccgtgggcaactgtgaccgcttgacaggggagtgtttcaaatgcatg
aacaacaccacaggctttcagtgtgagaagtgtctggagggattcttccacagcaaagcc
ggcgatgcatgtcgagcttgtaactgcaacccaaagggatcaatcgccagttcctgcagc
gagcagggccagtgcaagtgtaaagagggtttcgagggacaaaagtgtgtcggatctacg
tgtccatcatgcttcaaccctgttaagagccagattgggaagtacgtgaagaagctgcag
caggtggaggctctttttaatgaagtggggactggtggtgtggacatcacaagggccatg
gagaaagcaatcagcactgctgaggaaatggtcaagacagtggaaagtgaagcggaatca
cttattgaggcagagaagagtcttcatgcccagctggtagccatcggcaacgatcagctg
aaagacgagggaaaaatacaggacatcttacagatcgtggagagcgtcgtccgacaggag
cggcagtatcagacagaagtggctgacatccagaaactcatcagtgatattaggcaaaat
ctgcagaaggccaagcaggacatccaatcaattgagctcccctcaagtgatgcggtaccc
ggtacaaacatcgcgtccgatttggttcagaaagcaagcgatctcgctgagaagcacatg
ggtgaggcagcaacagtggagcggacagcgaagagctctcttctcgaagctgagaaagct
ttggctcttatgcgcactgtcatcagtggagaaaacaaagtcacagagcaactaaatggc
ctcaggactcagtacgagacagacatagcccaggtgaatgccatgaacagacaggcgtct
cgtctgagtaaagcagcagagacggaaagcacagtggcactggatactctgaaacaaata
tctgacctggagaaaaaccttccaaaggccccaaagaaggacatcaccagcttggttgcc
acactggatggtttgaagaattcatttgggagtaacgtgtcagggttcctggagctgcat
aatcaggccggggatgatcagagagaggcagtggagctaatgaaacaacttaaaaatgct
gagcaggtccaggaaaacctgcttgccagggccaccattgccaaagcagatgcagataaa
gccctgaagctctttaacaatctgggcagtgtggatcaggctctggagaaactcaaagga
tttgaagcccagctcaatagtagtaaggctttggctgatgatgcccttagtaaactgccc
ataattagtggcattattgggaaagccatggtcaacaacgacaagactcaggccattctg
gaccagctgggtgacttcagtgatgctctgggcacgctcgacaagctaaacatctctctg
gccaaagtagagaaaatatctggttccctgccgtcctcgtcagatcttttgaaaacagct
acggcgctgaagggaggcctggaagtgctaaataaccaagcagtctcaaccatgaacaaa
ctgaccgaggagaaaacaaacgcagagagagagcgggagctagccgaggaggttaattgg
gaggccagtggagcatatattaatgcaaataacactagaggtgctgtcggagatgctctg
aagaccgttaataaccttctaggattaattggaacaccaggagctgtggatgaaaagaag
gtgacggatctggagaacgctatagccacgagccgtagacgtgtggagacagagctcagg
cccagactcagagagctagaggacaaagaggctgagcagagagctgccatcacacgcatg
atcaacgatatcgacaccatcctggctgatatcgacaaccttgagcacattaaccgtacc
attccaactagctgctataacacgccgcccatcgagagggcttag

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