Ictalurus punctatus (channel catfish): 108267337
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Entry
108267337 CDS
T04658
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04382
Cornified envelope formation
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108267337 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108267337 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108267337 (lamc2)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Lysozyme_like
Motif
Other DBs
NCBI-GeneID:
108267337
NCBI-ProteinID:
XP_017326854
Ensembl:
ENSIPUG00000016890
UniProt:
W5UL58
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All DBs
Position
7:253706..267561
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AA seq
1114 aa
AA seq
DB search
MKSAWICLCAICVWYPVQGTYLSSRCACNGKALYCVRDSLGLRCANCQDNTDGRHCESCK
EGFYHQRAGESCLPCYCNPTGSEGSGCNSQGQCVCKRGVQGAQCDRCANGSPITATGCEP
LQQKTCFCNGHSNECSPAQGYSVYNIISTFDQGTEGWRVVTAPSVSPSQVQFRWSPTHHS
VEVISADVMPVYLSAPAQYLGNQALSYGQTLSFVLRLNRGVRYPSTSDVVLEGAGLKVSA
PLGNMRTVISCGKKITYTFRLDEQPSSRWNPQLSVLEFQTLLSNLTAIKIRVTFGEGGNG
YLDDVVLVSARLGPGLPASWVEKCRCPTGYEGRFCERCATGYKRRFPGQGVRSQCEPCAC
RGGSCDPETGDCYSADETPSGQACGTGYYSDPEIPGACKKCPCPMGYICSLTAGTLNVNC
RCPPGTTGSRCQKCSDGFYGDPLGESGVQRPCQSCQCNGHLDLNAVGNCDRLTGECFKCM
NNTTGFQCEKCLEGFFHSKAGDACRACNCNPKGSIASSCSEQGQCKCKEGFEGQKCVGST
CPSCFNPVKSQIGKYVKKLQQVEALFNEVGTGGVDITRAMEKAISTAEEMVKTVESEAES
LIEAEKSLHAQLVAIGNDQLKDEGKIQDILQIVESVVRQERQYQTEVADIQKLISDIRQN
LQKAKQDIQSIELPSSDAVPGTNIASDLVQKASDLAEKHMGEAATVERTAKSSLLEAEKA
LALMRTVISGENKVTEQLNGLRTQYETDIAQVNAMNRQASRLSKAAETESTVALDTLKQI
SDLEKNLPKAPKKDITSLVATLDGLKNSFGSNVSGFLELHNQAGDDQREAVELMKQLKNA
EQVQENLLARATIAKADADKALKLFNNLGSVDQALEKLKGFEAQLNSSKALADDALSKLP
IISGIIGKAMVNNDKTQAILDQLGDFSDALGTLDKLNISLAKVEKISGSLPSSSDLLKTA
TALKGGLEVLNNQAVSTMNKLTEEKTNAERERELAEEVNWEASGAYINANNTRGAVGDAL
KTVNNLLGLIGTPGAVDEKKVTDLENAIATSRRRVETELRPRLRELEDKEAEQRAAITRM
INDIDTILADIDNLEHINRTIPTSCYNTPPIERA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgcttggatctgtttgtgcgcaatctgcgtctggtatccagttcaaggaaca
tatctgtcctcgagatgtgcatgtaatggaaaggctctgtactgcgtgcgggactccctg
ggcctgcgctgtgcgaactgccaagacaacactgatggccggcactgtgagagctgtaag
gaaggattctaccaccagagagcaggagagagctgcttgccctgctactgcaaccccaca
ggctctgagggctcaggatgtaacagtcaggggcagtgtgtgtgtaagcgaggtgtgcag
ggggcccagtgcgatcgctgcgctaacggatctccaatcacagccaccggctgtgagcca
ctgcagcagaaaacctgtttctgtaacggtcattcaaacgagtgctctccagcacaaggt
tactcggtttacaacatcatctcaacatttgatcaagggacggagggctggcgagtcgtc
actgctccgagtgtaagtccatcccaggtgcaattccgctggtctccaacacaccacagc
gtcgaggtcatctctgcagacgtgatgcctgtttacctgtctgctccagctcagtatctg
gggaaccaggctctgagctacggtcagacactgtccttcgtactgcgtctgaaccgggga
gtccgttatccttctacctcagatgtcgtgttagaaggtgctggactaaaggtttctgct
ccgctgggaaacatgaggactgtcatctcctgtggcaagaaaatcacctacactttcagg
ctggatgaacaacccagcagcagatggaatccccagctctcagtgctggaatttcaaacc
cttttgagtaaccttacggccatcaagatccgagtcacgtttggggaagggggaaatggt
tatctggacgacgtggttctggtctcggctcggttgggtcctggcctccctgcatcctgg
gtagagaagtgccgttgtccgacaggttacgaaggacggttctgtgagcgctgcgctaca
ggctataaaagacgtttccctggtcagggtgtccgtagccagtgtgagccatgtgcctgt
cggggaggaagctgtgatcctgaaacaggggactgctactcagctgatgagacacccagt
ggacaagcctgtggtactggttactacagcgaccctgagattcctggagcctgcaagaag
tgcccatgccccatgggctacatctgctcgctcactgcagggacactgaacgtaaactgc
agatgcccacctgggacaacaggctctcggtgccaaaagtgcagcgatggattctatggc
gatcctctgggagagagtggcgttcagcgaccctgccagagctgccaatgtaacggacac
ttggacttaaatgccgtgggcaactgtgaccgcttgacaggggagtgtttcaaatgcatg
aacaacaccacaggctttcagtgtgagaagtgtctggagggattcttccacagcaaagcc
ggcgatgcatgtcgagcttgtaactgcaacccaaagggatcaatcgccagttcctgcagc
gagcagggccagtgcaagtgtaaagagggtttcgagggacaaaagtgtgtcggatctacg
tgtccatcatgcttcaaccctgttaagagccagattgggaagtacgtgaagaagctgcag
caggtggaggctctttttaatgaagtggggactggtggtgtggacatcacaagggccatg
gagaaagcaatcagcactgctgaggaaatggtcaagacagtggaaagtgaagcggaatca
cttattgaggcagagaagagtcttcatgcccagctggtagccatcggcaacgatcagctg
aaagacgagggaaaaatacaggacatcttacagatcgtggagagcgtcgtccgacaggag
cggcagtatcagacagaagtggctgacatccagaaactcatcagtgatattaggcaaaat
ctgcagaaggccaagcaggacatccaatcaattgagctcccctcaagtgatgcggtaccc
ggtacaaacatcgcgtccgatttggttcagaaagcaagcgatctcgctgagaagcacatg
ggtgaggcagcaacagtggagcggacagcgaagagctctcttctcgaagctgagaaagct
ttggctcttatgcgcactgtcatcagtggagaaaacaaagtcacagagcaactaaatggc
ctcaggactcagtacgagacagacatagcccaggtgaatgccatgaacagacaggcgtct
cgtctgagtaaagcagcagagacggaaagcacagtggcactggatactctgaaacaaata
tctgacctggagaaaaaccttccaaaggccccaaagaaggacatcaccagcttggttgcc
acactggatggtttgaagaattcatttgggagtaacgtgtcagggttcctggagctgcat
aatcaggccggggatgatcagagagaggcagtggagctaatgaaacaacttaaaaatgct
gagcaggtccaggaaaacctgcttgccagggccaccattgccaaagcagatgcagataaa
gccctgaagctctttaacaatctgggcagtgtggatcaggctctggagaaactcaaagga
tttgaagcccagctcaatagtagtaaggctttggctgatgatgcccttagtaaactgccc
ataattagtggcattattgggaaagccatggtcaacaacgacaagactcaggccattctg
gaccagctgggtgacttcagtgatgctctgggcacgctcgacaagctaaacatctctctg
gccaaagtagagaaaatatctggttccctgccgtcctcgtcagatcttttgaaaacagct
acggcgctgaagggaggcctggaagtgctaaataaccaagcagtctcaaccatgaacaaa
ctgaccgaggagaaaacaaacgcagagagagagcgggagctagccgaggaggttaattgg
gaggccagtggagcatatattaatgcaaataacactagaggtgctgtcggagatgctctg
aagaccgttaataaccttctaggattaattggaacaccaggagctgtggatgaaaagaag
gtgacggatctggagaacgctatagccacgagccgtagacgtgtggagacagagctcagg
cccagactcagagagctagaggacaaagaggctgagcagagagctgccatcacacgcatg
atcaacgatatcgacaccatcctggctgatatcgacaaccttgagcacattaaccgtacc
attccaactagctgctataacacgccgcccatcgagagggcttag
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