Ictalurus punctatus (channel catfish): 108267339
Help
Entry
108267339 CDS
T04658
Symbol
ahr1a
Name
(RefSeq) aryl hydrocarbon receptor 1a isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108267339 (ahr1a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108267339 (ahr1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
bHLH_NPAS4
PAS_4
Motif
Other DBs
NCBI-GeneID:
108267339
NCBI-ProteinID:
XP_017326861
Ensembl:
ENSIPUG00000002501
UniProt:
A0A2D0R9U8
LinkDB
All DBs
Position
1:complement(14120704..14149989)
Genome browser
AA seq
894 aa
AA seq
DB search
MSHSQDGQGNYLKRLRYQSLLATNLYLNVKESPVEPAKSNPSKRHRDRLNGELDRLASLL
PFHQDIVAKLDKLTVLRLSVGCLRAKSHFNTVLKTSSSNQSANNGAKAHVQELPEGELLL
QVINGFLLVVTCNGTVFYVSSTVQDYLGFHQSDIIHQSVYELIHTEDRAEFHRQLHWALN
PSNSPDTGQLVEATQDAQLPHTYYNPEQLPPENSAFLERNFVCRLRCLLNNSSGFLAMNF
QGRLKFLHGQNEKSPEGKPIPPQLALFALACPLQPPSILEIRAKNFFFRTKHKLDFTPTA
CDAKGKIVLGYTEAELCYRGSGYQFIHAADMLHCAENHMRMIKTGETGLTVFRLLTKQSA
WVWVQANARLIYKNGRPDFIIASQRVLMDEEGEETLKKRSLMLPFSLTTGEAVLYDMNLS
KSFSGTPSGQESIASVTPGDGNQQKLPGGLDPNSLLGSMMKQDESIYVCPLGSDDLMRAR
DPKEEEEELGGIFSSNWQKNILSLPETSLFKPDPAISSGGEESNCELTSFMGSLGITPED
LDLLQQEELFLNVELDGRYGFKDFTDDVLSYVQESLRKKVDFALPSSVQANPEERCVPSI
APQSHPPSQPSLSPWSQGQQLFLPSPLMSQSQQHHSSFLAKPSEPKMQPFILKQSHSQPQ
QSSSMQNHQGSLQAQSHLYKQPSLTPHGLQLNPQEQSPHPVNHKHVYQPEHSCFFNPEKE
VYHRLKHTEVNGSGSVSLTEGSSINQQLPAVLQSGLQQPGSFYLESNHLHQGLPYMSQLN
TVSMNCSQELPPSYIPTGHSHVSEYLEELLTCLDTVDQEKHGRSGEHQGGSHPLCAQSSL
NHRMLQQPYMGQNGALGDLQGSLEEDGIGGLAAQPPQQNSCDSRPHPDLSMGYM
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactctcaagacggacaggggaattatctgaagcgacttcgttatcaaagcttg
ttggcaaccaacctatatctgaatgtgaaggagtctccagtggaacccgcaaagtcaaat
ccctctaaaaggcaccgtgatcgactgaatggagaactggaccggctggccagcctgctg
ccttttcatcaggacattgttgctaaactggacaaattaaccgttctcaggctgagcgtt
ggctgtctgagagccaagagtcacttcaatactgtcctgaaaaccagcagctctaatcag
tcagcaaacaacggcgcaaaagcacatgttcaggagttgccagaaggtgaactactgtta
caggtcatcaatggatttttattggtggtcacctgtaatggtacagttttttatgtctct
tcaactgttcaggactatctcgggttccatcagtcagatatcatccatcagagtgtttat
gagcttattcacacagaagacagggctgagtttcaccggcaactccattgggcgctcaac
cccagtaactctccagacactgggcaactagtagaagctactcaagatgcacagttacca
catacatattacaaccccgagcagttaccaccagagaactctgcctttctggaacgaaat
tttgtgtgcaggttacgatgtctactgaataactcctctggctttctggccatgaacttt
cagggccgtttaaagttcttgcatggacagaatgaaaagtctccagaaggcaaacccatt
ccacctcagctggccttatttgccctggcctgtccactccagccgccctccattctggag
atccgtgccaaaaactttttcttcaggaccaaacacaaactggactttaccccaactgca
tgcgatgccaaagggaagattgtgctgggctatacagaggcagagctgtgctaccgtggc
tcgggctaccagtttattcatgccgcagacatgctacactgtgctgagaaccacatgcgc
atgataaagacaggtgagactgggttgactgtatttaggctgcttaccaaacagagtgcc
tgggtttgggtgcaggctaatgccagactcatctacaaaaacggccggcctgattttatc
attgcctctcaaagagttctcatggatgaagaaggagaagagaccttgaagaaacgtagc
ctcatgcttcccttcagcctcaccacaggagaggctgtactgtatgacatgaacctgtcc
aagtcctttagcggcactccctccggccaggaatctattgcatctgttactccaggagac
ggtaaccaacagaaactccctggtggactagatcccaactctctcctgggctccatgatg
aaacaagatgagtctatctatgtatgccctttaggttcagatgacttaatgagagctcgg
gaccccaaggaagaggaggaggagcttggtgggatcttttctagtaactggcaaaagaac
attctttctcttcctgagacatcgctctttaaaccagatcctgccatcagctctggaggg
gaagagagcaactgtgagctcacgagcttcatgggcagtctggggatcactccagaagac
ttggatcttctacaacaagaagagctgttccttaacgtagagctggatggtcgatatggc
ttcaaagactttactgatgatgttctctcctatgttcaagagtctcttaggaagaaggtg
gactttgcacttcccagcagcgttcaggccaatccggaggagaggtgtgtccctagtatt
gcacctcagtcacatcctccatcacagccatcactgagcccatggtcacagggtcagcag
ctttttttacctagtcctttaatgtcacagtcccagcaacaccactcttcttttcttgcc
aagccttcagagccaaagatgcagccgtttatactaaagcagtcccattcacaacctcag
caatcctcttctatgcaaaatcatcaggggtctcttcaagcacagtctcatctgtacaaa
cagccaagcttaacaccacatggacttcagttgaatccacaagagcagtcacctcatcca
gtgaaccacaagcatgtataccaacctgagcactcatgcttctttaatcctgagaaggag
gtgtatcatagactgaagcacactgaggtgaatggcagtggcagtgtttctcttacagag
ggcagctccattaaccagcagcttccagctgtcttacagtctggattgcagcaacctgga
agcttttacctggaatccaaccatttgcatcagggacttccttatatgagccaattaaat
actgtgtccatgaactgcagccaggaacttcctccctcctacattcctactgggcactca
catgtcagtgagtatctggaggagctgctaacctgcttggatactgtggatcaggagaag
catgggcggtctggagagcaccagggaggaagtcatcctctctgtgcacagtctagcctc
aatcatagaatgctccagcagccatacatgggccagaatggtgcactcggagatctgcag
ggaagcttagaagaggatggtatcggcggcctcgcagcacagcctcctcagcagaattct
tgcgacagcaggccccacccagacctgtccatgggatacatgtga
DBGET
integrated database retrieval system
