Ictalurus punctatus (channel catfish): 108267391
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Entry
108267391 CDS
T04658
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108267391
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108267391
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108267391
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108267391
NCBI-ProteinID:
XP_017326910
Ensembl:
ENSIPUG00000002198
UniProt:
A0A2D0RAN0
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Position
7:complement(4861475..4918423)
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AA seq
642 aa
AA seq
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MEEKQFSGILNGAVPGEQVKKDENSRRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRN
GGGAFMFPYFIMLVFCGIPLFFLELSFGQFTSLGCLGVWKVSPMFKGVGYGMMVVSTYIG
IYYNVVICIAIYYFFMSMTNLLPWTYCNNPWNTPDCSGVMGTLKANATLTNVTANAVSGL
TEVINRTKRTSPSEEYWRNYVLNISDGIGNFGEVRLPILGCLAISWVVVFLCLIRGVKSS
GKVVYFTATFPYVVLTILFIRGITLDGAISGIQYYLTPQWQKILDAKVWGDAASQIFYSL
GCAWGGLITMASYNKFHNNCFRDSIIISVTNCATSVYAGFVIFSILGFMAQHLGVDVSEV
ADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAVVDEIGTDK
IIRNKTFITLGVSVLGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMCICIMYVYG
HRNYFKDVEMMLGFPPPVFFRVCWRFISPLIISFILIFTVIQYKPITYNDYVYPDWSLVI
GFCMALSSVICIPVYALYKIAMSDGTTFLERLKNSMKPHPSWGPALQEHRKGRYATAEPE
SVDMRSLKDEEKEKDQDKEKKEEIGLTIKGSNGSTLNPTPSV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaacagttttctggcattttgaatggagcggttccaggggaacaagtgaag
aaggacgagaattctcgacgaggaaactgggggaaccagattgagtttgtcctgactagt
gtgggctacgcagtggggctgggcaacgtctggaggttcccttacctctgttacaggaat
ggcggaggtgccttcatgttcccgtactttatcatgctggtgttttgtggcatcccgctg
tttttcttggagctctcctttggccagttcacctcattgggctgcctgggagtgtggaag
gtcagccccatgttcaaaggcgttggctatggaatgatggtggtctccacttacatcggc
atctattacaatgtggtgatctgtatcgcaatctactactttttcatgtccatgaccaat
ctgctgccatggacatactgcaacaacccctggaacaccccagactgcagtggcgtaatg
ggcacactgaaggcaaatgccaccttgaccaacgtcaccgctaatgcagtgtcaggcctc
actgaggtgatcaaccgcaccaagaggacgagtcccagtgaggaatactggaggaactat
gtactgaacatctcagatggcatagggaactttggtgaagtccgcctccccatcctgggc
tgcctggctatctcctgggtggtagtgttcctctgccttatccgtggggtgaagtcctct
ggcaaggtggtgtacttcacagcgaccttcccctacgtggtgctgaccattctcttcatt
cgaggcatcacattagacggtgccatcagtggaattcaatactacctcactccacagtgg
cagaaaatcctggatgccaaggtgtggggtgacgctgcttctcagattttctactctctg
ggctgtgcctggggtgggctcatcaccatggcttcctataacaaatttcacaacaactgt
ttcagagacagcatcattatcagtgtgacgaactgtgcaacaagcgtgtacgccggcttt
gtcatcttctccatcctgggcttcatggcacagcacctgggagtggacgtgtccgaggtg
gcggaccacgggccaggcctggccttcgttgcctacccggaagccctgacgctgcttccc
atctcaccactctggtcgctgcttttcttcttcatgctcatcctgctcggtctcggcaca
cagttctgtcttttggagacgttggtgacagccgtagtggacgagatcggcacggacaag
atcatccgaaacaaaaccttcatcacactcggagtgtccgtcctcgggtttctcttgggg
gtaccactgaccacacaggcgggaatatactggctgctgctgatggataactacgctgcc
agcttctcactagtcatcatctcctgcatcatgtgcatctgcatcatgtatgtttatggc
cacagaaactactttaaggatgtagagatgatgctgggcttccctccaccggtgttcttc
agggtctgttggaggttcatctctccacttattatctcgttcatcctgatcttcacagtg
atccagtacaaacccatcacttacaacgattacgtgtacccagactggtctctggtcatc
ggcttctgcatggccctgtcctcggtgatctgtattcccgtctacgccctttacaaaatc
gccatgtctgatggaaccacgtttttggagcggttgaagaactcgatgaagccacatccc
agctggggtccggcgctccaagagcaccgcaagggccgctacgccacggccgaacccgaa
tccgtggacatgcgttctctcaaggatgaggagaaagagaaagatcaggataaagagaag
aaggaagagatcgggctcaccattaagggcagcaacggctccacgctcaacccgacaccc
agtgtatag
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