Ictalurus punctatus (channel catfish): 108267453
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Entry
108267453 CDS
T04658
Symbol
map1sb
Name
(RefSeq) microtubule-associated protein 1S isoform X1
KO
K10429
microtubule-associated protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108267453 (map1sb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108267453 (map1sb)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108267453 (map1sb)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108267453 (map1sb)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
108267453 (map1sb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
108267453
NCBI-ProteinID:
XP_017327012
Ensembl:
ENSIPUG00000014208
UniProt:
A0A2D0R8V6
LinkDB
All DBs
Position
7:12214409..12224190
Genome browser
AA seq
1328 aa
AA seq
DB search
MPSSSAEPPIMAEEERVSHPGFIPARYSALLIISATPERNIRDFIASEIHRGLRVWDVDL
TVCNLDEELRVFVSRRSSQSCSDVKGQRILELSTSVLSCRVVFSPSEETLYSQIYGLITD
TSQHKLLVLTGRSLEDSGDLVLHTGHFTPNHFIQILTDEEIQHQLNSASVTGKATLTLSC
PKTGTWKNSILGKHNLQDVIDIKVNPLMVLPKMDGLQEFTNHLCENIEPPSPFDLLEPPS
TVGFLKLCRPCCYIFPGGRGDCAFFAVNGFNVLVNGGSDPRSCFWKLVRHLDRVDSVLLS
HAGTDNLPGINSLFARKVAELEEDNSSDSEKKEKWQKNLISPELGVVFFNAPKRLKKIQG
DPNVLRSSDQAGFTLRHLEKLKISTEPLFRNSSGPIEPVILFQKMGVGCLELYVINPVKG
SKEFEDFMNRWPENSTSPKGSEVPLSSLVSICTLLVWHPASPHEKIIRVLFPGSTPQTKI
LEGLEKLKHLDFLKCPVVCSKDIEPKAEKNPKRAESQDSLKSGIKESRSSSATTKEKSVR
GYPEPKDQVKVKSMNGEEKPKTVEIGVKPKLNKTIARKESFKANKKDDRSTMPVSKKQEI
GQRKMSGKKDSPLNKQKNDEKSEERKNNLMGKEAKKLAPRSASPSADPNKSASAKKNEMK
VNNGTEDRVKSNKSNKEQQNQKLSGDVGDPKPSEISSPEDLTAEFLEMEKEQSHELSAKI
PDMPSRKESGSEDDPKNIHVSPEKALDDILNPVKSTEASGIVKTPKSEHSVNMDLTPTEF
NWLDGALKDNPPKSVQDEVCISPDEKTLELSPPRSGPNSAGHTPYHLSPEETWASRDRSS
LVAKMCLGSDSQQGGSCKTSETGCPKSTQESNSSSSKEKHSSFLSLSSFKDIMPDISPTV
TTTTHSLPAEVSSPQSTEVDESLSMSFEQVLPTVSESTNEDEMSYSNGHYADPEFKVGMS
LSLKMAHTKRVMNDASDGRPSGPQSLMFDAPNDVDLCLVSPCEFKHFKHLEKDQHTLSPG
LMATSPHDFSDDSDHSQEVVKPLHQAFFSNKATHPAQETPLTSASDYFPTGSDSDPQPGL
EECPSITADGALDSDEEAGVHCSSENLNLNNSPLQDPLPVPLKDIPPLPAQPGACMPDPG
KLGKTGSKNRKMTVVTQRLSASSTSAQASKSRTGTQTGSVGSLRSNSTADTPVSRSSHSG
AKRPTTAAGIKGITSVYLDLAYLPSGNAASTIDVEFFCRLRSSCYIISGDDTLKEDMMRP
ILDALLDGKSVWPEDVPVTLIPTFESMMMHEWYHQTQEKQQQLGITVLGSNSTVAMQEET
FPACKVEF
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgccatcatcctcagcagaacctcccatcatggcggaggaggagcgcgtgtcgcacccc
ggcttcatccccgcgcgctactcggctctcctcattatcagcgcgactccggagcggaac
atccgggactttatcgcctcagagatacacagagggttgcgggtgtgggatgtggatctg
acggtgtgtaatttggatgaagagctaagagtgtttgtgagtcgtcgctcctctcagagc
tgcagtgatgttaaaggtcagcggatattggagctcagtacgagtgtgttaagctgcaga
gttgtcttcagtccctcagaggaaacgctctactctcagatatatggcctgataacggac
acgtctcagcacaagctgctcgtgctgactggacgctccctggaggacagcggggacctc
gtcttacacaccggacatttcactccaaaccacttcattcagatcttaacagacgaagag
attcaacatcaactgaactctgcgagtgtgacaggaaaagcaaccctcacccttagctgc
ccgaagactggaacatggaagaattccatactcgggaaacacaatttacaagatgtaata
gacattaaggtgaaccctttaatggtgctgccaaaaatggatggccttcaggagttcacc
aatcatctctgcgagaacattgagccaccttcgccttttgatctactagaacccccaagc
acagtggggttcctcaaactctgtcgtccctgctgctacatatttccaggcgggagaggg
gactgcgcctttttcgctgtcaacggattcaacgtcctggtcaatggtggatcggatcca
cggtcttgtttctggaagttagtcaggcatctggaccgtgtagattctgttcttctatct
cacgctgggactgataatcttccagggattaatagtctttttgcaagaaaggttgcagag
ctcgaggaagataattcctctgactcagagaagaaggaaaaatggcaaaaaaatctgatc
tctccagagttgggtgtcgttttctttaatgcaccaaaaaggctgaaaaaaattcaaggt
gatccaaatgtgctgcgaagtagtgatcaagcaggatttactttacgtcatttggagaag
ctcaagatctcaacagaaccactatttcgcaattcgagcggtcccatagaaccagtgatt
ctgtttcagaagatgggagtcggatgtcttgagctgtatgtcattaacccggttaaaggc
agcaaagagtttgaggacttcatgaaccgctggcctgaaaacagtaccagtcccaaaggt
tcggaagttcccttaagttctctggtgtctatttgcactttacttgtatggcatcctgct
agcccacatgaaaagatcatacgagtccttttccctgggtcaacgccacaaacaaagata
ttggaaggtctggaaaagctgaagcacctagattttctcaagtgccctgtagtatgctcc
aaagatatcgaaccaaaggcagaaaagaacccaaaacgagctgaaagccaagatagcctc
aagtctggcatcaaagaatccaggtcaagcagtgccacaacaaaggagaaatcagtccgt
gggtatccagagccaaaagaccaggtcaaggtcaagtctatgaatggtgaagaaaaaccg
aagactgttgaaattggtgtcaagcctaaactgaacaaaaccattgcaaggaaggagtct
tttaaagccaacaaaaaagatgacaggagtaccatgccagtgtcaaaaaaacaggaaatt
ggacagaggaaaatgtcaggcaaaaaggattcccctttgaacaaacagaagaatgatgaa
aagagtgaagaaagaaaaaacaatttgatgggaaaagaggccaagaaactggctccaagg
tctgcatccccttctgcagacccaaataaatctgcaagtgcaaagaaaaatgaaatgaaa
gtaaacaacgggacagaggacagagtaaaaagcaataaatctaacaaggagcagcaaaac
cagaagctctcaggtgatgtgggggatccaaaaccctcagagatctcttcacccgaggat
ttgacagcagagtttctggaaatggagaaagagcagtcacatgaattgtctgctaaaatt
cctgacatgccatcaaggaaggaatcaggaagtgaggacgatccaaaaaacatccatgtt
agtccagagaaggctttagatgacatactgaatccagtcaagtccactgaggcttcagga
attgtcaagactccaaaaagtgagcacagtgtaaatatggaccttacacccactgagttt
aactggcttgatggagctttgaaggacaatccacccaaaagtgtccaggatgaagtctgc
attagcccagatgagaagaccttggagttgagtcctccaagatctggtccaaacagtgct
ggtcatacaccatatcacctttcccctgaggaaacttgggcctccagagaccgcagcagc
ttagtagctaagatgtgcttgggatcagacagccagcaaggaggatcatgtaagacttca
gagactggatgtcccaaaagtactcaagaaagcaactccagttcttctaaagagaaacac
tccagtttcctgtctctgagctctttcaaggacattatgcctgatatatcacccacggtg
accaccaccacccactcattgcctgctgaagttagctcaccacaatccactgaggttgac
gagtctttatcgatgtcctttgagcaggtgcttcctacggtcagtgaatccacaaatgag
gatgagatgtcctactctaatggacactatgcagatcctgagttcaaagtaggcatgtct
ttgtctttaaagatggcacatacaaagagggtgatgaacgatgcatcggatggacgtcct
tctggaccacagagtctgatgtttgatgctcctaatgatgtcgacctttgtttggtttct
ccctgcgaatttaaacattttaaacatctagagaaagatcagcacaccctttcaccagga
cttatggctaccagcccgcatgacttctcagatgacagcgatcactcccaggaagtggtg
aagcccctgcaccaggcatttttcagcaacaaggccactcacccagcccaggaaactcct
ctcacctctgctagcgactacttccccactggctcggattccgaccctcaacccggtctg
gaggaatgtccttctatcactgcagacggtgcgttagattctgatgaggaagcaggtgta
cactgctcctctgagaacttgaacctgaataattcaccacttcaggatcctcttcctgtt
cctctcaaagatatccctcctcttcctgcccagcctggggcctgcatgcctgatcctggg
aaacttggtaaaacaggttcaaagaacaggaagatgactgtggttacacagaggctaagt
gcatctagcacttcggcacaagctagcaagagcagaacagggactcagactggttcggtt
gggagtctgaggtcaaattctactgcagacactccagtttcacgttcctcccattctggt
gcaaaaagaccaaccaccgcagcaggtatcaagggcatcacctctgtgtatttggacctg
gcgtacctcccatctggaaatgcagcatccactattgatgttgaattcttctgccgtttg
cgatcatcctgttacattataagtggagatgacactttgaaagaagacatgatgagaccc
attctggatgctttgctagacggaaagtctgtttggcctgaagatgtgccggtgacgtta
atccccacatttgagtcgatgatgatgcacgagtggtaccatcagacccaggagaagcag
cagcagctgggcatcacagtactgggtagcaacagcacagtggccatgcaagaggaaacg
ttccctgcctgtaaagtggagttctga
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