KEGG   Ictalurus punctatus (channel catfish): 108267458
Entry
108267458         CDS       T04658                                 
Name
(RefSeq) splicing factor 1
  KO
K13095  splicing factor 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108267458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108267458
Spliceosome [BR:ipu03041]
 Complex A
  Other components
   Complex A specific factors
    108267458
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP KH_1 zf-CCHC zf-CCHC_3 KH_12 zf-CCHC_5
Other DBs
NCBI-GeneID: 108267458
NCBI-ProteinID: XP_017327018
Ensembl: ENSIPUG00000022924
UniProt: A0A2D0R8V2
LinkDB
Position
7:23174541..23187620
AA seq 660 aa
MATGANATPLGKLHPSIGAKRGFDSGPGAGLMPPPGPPASFPLQNFPQMPGAAFPGFPGA
AGSFPTPPIVGPQSQIGDMSLKKRKKSRWSSETPDQKTIIPGMPTVIPPGLSREQERAYI
VQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKLEEERHSLI
TEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECCA
KIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETP
EDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKCGGAGHIASDCK
FTSTYTQRQGDPPQSAQDKARMDKEYLSLMAELGEAPVPAPGGGHNNPSSGPRGTGPNSN
QPPPNRPPWMNSGHSDNRNFHGMHGGPGGHGGPHNFPPPMPNMGGPPMPPNPNGMPPPWM
QPPPPPMGQGPSPHGHPMGLLPPPMGMMPPPPPPPNNQPPPPPSGPLPPWQQQAPPPPPT
SSMATSAPLPWQQNTTTTSTPATGNLPPWQQPQPAASSAAQPPPPMGNPSMVPPPPGVQP
PLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNFVTMMGIPGMPPFGMPPAPPPPPPQN
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggcaacgggagcaaacgcaaccccgctggggaagctgcacccgagtatcggcgctaaa
cggggcttcgactcggggcccggtgctggcttaatgcctccgccggggcctccggcctct
ttcccgctccaaaactttccacagatgccgggtgctgctttcccaggatttcccggggct
gctggttcatttccaaccccacccattgtcggaccgcagtctcagatcggagatatgagt
ctgaagaagaggaaaaagagtcgctggagcagcgagacccctgatcagaagaccattatc
ccaggaatgcccactgtcatccctcccggcctttctcgtgaacaggagagagcttatata
gtccaactgcagatcgaagacctgactcgtaaactgcgtacaggagacctgggaatccct
gttaatcctgaggacaggtccccttctcccgagccaatctataacagcgaggggaagagg
ttgaacacgcgtgagtaccgcaccagaaaaaaactggaagaggagaggcattcactcatc
actgagatggttgggctgaaccctgagtttaagccacctgctgactataagcctccagcc
accagagtcagtgataaagtgatgatcccacaggacgagtatccagaaatcaactttgtt
ggacttctcattgggccacgtggcaacacgctgaagaacattgagaaagagtgctgtgct
aagatcatgatccgtgggaagggttctgttaaggagggcaaagtgggccgtaaggatgga
cagatgctcccaggagaggacgagcctctacacgccttggtcactgccaacaccatggag
aacgtcaagaaggccgtagagcagatccgtaatatcctgaagcagggtattgagacccca
gaggatcagaatgacttgaggaagatgcagctgagggagctggctcgactcaatggcact
ctgagagaggacgataacaggattctgcgcccttggcaaaattctgagcctcgtagcatt
accaacactaccctgtgcacgaagtgcggaggagctggacatatcgcctctgactgcaag
tttactagtacttatacccagaggcaaggtgatccaccccagtcagcccaggataaggcc
cgtatggataaagagtatctgtctctaatggccgaactgggagaggctccggttcccgca
cccggtggtggacacaacaacccatccagtggcccccgaggaactggacctaacagcaac
cagccacctccaaaccgtcctccctggatgaactctggccattcagacaacaggaacttc
catggcatgcatggcggtccaggtggtcatggaggtccccacaatttccctccacccatg
cccaacatgggtggaccacccatgcctcccaaccctaatggcatgcccccaccatggatg
caacctccccctccacccatgggccagggcccttctcctcatggacacccgatgggtttg
ttgcctcctcctatgggcatgatgccaccgcccccaccgccaccaaacaaccaacctccc
ccacccccatccggacctctgccaccttggcaacagcaggccccaccccctccacctacc
agcagcatggcaactagtgccccgctgccatggcagcagaataccactaccacttctacc
ccagctacgggtaacctgcctccatggcagcaaccccagccagcagcaagctctgctgcc
cagccccctcctcctatgggaaacccctccatggtgccccctcctcctggagttcagccc
ccactgccccctggtgcccctcctcctccccctccaccaccaccaggctcagcaggcatg
atgtatgcaccccctccacctccaccacccatggaccccaactttgttaccatgatggga
atcccaggaatgcctccatttgggatgccacctgccccacctcccccaccaccccaaaat
taa

DBGET integrated database retrieval system