Ictalurus punctatus (channel catfish): 108267458
Help
Entry
108267458 CDS
T04658
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108267458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108267458
Spliceosome [BR:
ipu03041
]
Complex A
Other components
Complex A specific factors
108267458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
zf-CCHC_3
KH_12
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
108267458
NCBI-ProteinID:
XP_017327018
Ensembl:
ENSIPUG00000022924
UniProt:
A0A2D0R8V2
LinkDB
All DBs
Position
7:23174541..23187620
Genome browser
AA seq
660 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDSGPGAGLMPPPGPPASFPLQNFPQMPGAAFPGFPGA
AGSFPTPPIVGPQSQIGDMSLKKRKKSRWSSETPDQKTIIPGMPTVIPPGLSREQERAYI
VQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKLEEERHSLI
TEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECCA
KIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETP
EDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKCGGAGHIASDCK
FTSTYTQRQGDPPQSAQDKARMDKEYLSLMAELGEAPVPAPGGGHNNPSSGPRGTGPNSN
QPPPNRPPWMNSGHSDNRNFHGMHGGPGGHGGPHNFPPPMPNMGGPPMPPNPNGMPPPWM
QPPPPPMGQGPSPHGHPMGLLPPPMGMMPPPPPPPNNQPPPPPSGPLPPWQQQAPPPPPT
SSMATSAPLPWQQNTTTTSTPATGNLPPWQQPQPAASSAAQPPPPMGNPSMVPPPPGVQP
PLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNFVTMMGIPGMPPFGMPPAPPPPPPQN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagcaaacgcaaccccgctggggaagctgcacccgagtatcggcgctaaa
cggggcttcgactcggggcccggtgctggcttaatgcctccgccggggcctccggcctct
ttcccgctccaaaactttccacagatgccgggtgctgctttcccaggatttcccggggct
gctggttcatttccaaccccacccattgtcggaccgcagtctcagatcggagatatgagt
ctgaagaagaggaaaaagagtcgctggagcagcgagacccctgatcagaagaccattatc
ccaggaatgcccactgtcatccctcccggcctttctcgtgaacaggagagagcttatata
gtccaactgcagatcgaagacctgactcgtaaactgcgtacaggagacctgggaatccct
gttaatcctgaggacaggtccccttctcccgagccaatctataacagcgaggggaagagg
ttgaacacgcgtgagtaccgcaccagaaaaaaactggaagaggagaggcattcactcatc
actgagatggttgggctgaaccctgagtttaagccacctgctgactataagcctccagcc
accagagtcagtgataaagtgatgatcccacaggacgagtatccagaaatcaactttgtt
ggacttctcattgggccacgtggcaacacgctgaagaacattgagaaagagtgctgtgct
aagatcatgatccgtgggaagggttctgttaaggagggcaaagtgggccgtaaggatgga
cagatgctcccaggagaggacgagcctctacacgccttggtcactgccaacaccatggag
aacgtcaagaaggccgtagagcagatccgtaatatcctgaagcagggtattgagacccca
gaggatcagaatgacttgaggaagatgcagctgagggagctggctcgactcaatggcact
ctgagagaggacgataacaggattctgcgcccttggcaaaattctgagcctcgtagcatt
accaacactaccctgtgcacgaagtgcggaggagctggacatatcgcctctgactgcaag
tttactagtacttatacccagaggcaaggtgatccaccccagtcagcccaggataaggcc
cgtatggataaagagtatctgtctctaatggccgaactgggagaggctccggttcccgca
cccggtggtggacacaacaacccatccagtggcccccgaggaactggacctaacagcaac
cagccacctccaaaccgtcctccctggatgaactctggccattcagacaacaggaacttc
catggcatgcatggcggtccaggtggtcatggaggtccccacaatttccctccacccatg
cccaacatgggtggaccacccatgcctcccaaccctaatggcatgcccccaccatggatg
caacctccccctccacccatgggccagggcccttctcctcatggacacccgatgggtttg
ttgcctcctcctatgggcatgatgccaccgcccccaccgccaccaaacaaccaacctccc
ccacccccatccggacctctgccaccttggcaacagcaggccccaccccctccacctacc
agcagcatggcaactagtgccccgctgccatggcagcagaataccactaccacttctacc
ccagctacgggtaacctgcctccatggcagcaaccccagccagcagcaagctctgctgcc
cagccccctcctcctatgggaaacccctccatggtgccccctcctcctggagttcagccc
ccactgccccctggtgcccctcctcctccccctccaccaccaccaggctcagcaggcatg
atgtatgcaccccctccacctccaccacccatggaccccaactttgttaccatgatggga
atcccaggaatgcctccatttgggatgccacctgccccacctcccccaccaccccaaaat
taa
DBGET
integrated database retrieval system