Ictalurus punctatus (channel catfish): 108267459
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Entry
108267459 CDS
T04658
Symbol
rbm4.1
Name
(RefSeq) RNA-binding protein 4.1
KO
K13187
RNA-binding protein 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108267459 (rbm4.1)
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108267459 (rbm4.1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
RRM_7
zf-CCHC_3
RRM_occluded
zf-CCHC_2
Calcipressin
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
108267459
NCBI-ProteinID:
XP_017327019
Ensembl:
ENSIPUG00000022931
UniProt:
W5U754
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All DBs
Position
7:23168910..23172792
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AA seq
428 aa
AA seq
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MVKIFVGNLSPNTTTDELRSLFSQYGKISECDIVKNFGFVHMENKAEAEEAIRNLHHYML
NGLAMNVEMSRGKPKASTKLHVGNISSSCTNQELRAKFEEFGPVVECDIVKDYAFVHMER
VEDAMEAIRGLDNTAFQGKLMSVKLSTSRLRTAPGMGERTGCYRCGQEGHWSKECPLDQN
GSYREGQGSEGYGAPRFGTSGGGGDRGFQQGFNGEPSFGSNYGPVQGFSRGTGYGGPGYG
RGMGTGMGTSTSTGTGYNGAMSFGVAAGYGMGATYGSEAAYSSGVSYGSAVPGFPARRAS
YDERDPYGVVDYYEKYRARPYGGNYFDDRQAVPLPGPPPPPPPASSAISTERMPSSSLDL
YERNPLAPPQAPGSSYYGRDRSPIRRLPLEVEGYAYDRAHVAPISSLPRSSAFDMPRDPY
ADRARYAY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaatcttcgtagggaacctttccccaaacacaactacggacgagcttcggtcc
ttgttctcccagtatggtaaaatatccgagtgcgacatcgtgaagaacttcggcttcgtc
cacatggaaaacaaagccgaggctgaggaagccattcgcaaccttcaccattatatgctc
aacggtctagccatgaatgtggagatgagccgagggaaacccaaagcctccaccaagctc
cacgtaggcaatatcagtagtagttgtaccaaccaagagctgcgggccaagtttgaagag
tttggccctgtggttgagtgtgacatagtaaaggattatgcctttgtccacatggagcgg
gtagaggatgcgatggaggccatccgaggcctagacaacacggcatttcaaggcaaactg
atgagcgtgaagctttcgactagccgcctgcgtacagcgccgggaatgggagagagaacg
ggttgttatcggtgcgggcaggaaggccactggtccaaagagtgcccactggaccagaac
ggctcctatcgtgagggccagggctcagagggatatggcgctccccggttcggtacgagt
ggcggtggtggtgatcgcggtttccaacagggcttcaatggcgaaccgagctttggcagc
aactatgggcctgtgcaaggcttctcccgtggtactggttatgggggtcctgggtatggc
aggggcatgggcacaggcatgggaacgagcacaagcacgggcacgggctataatggtgcg
atgagtttcggtgtcgcggcgggatacggcatgggcgcgacgtacggcagtgaggcggca
tacagcagtggcgtcagctacggcagcgcggtgcccgggttccctgcgcggcgagcgtcc
tatgatgaacgggatccgtacggggtggtggactactatgaaaagtatcgtgcgcgtccc
tatggaggcaattattttgatgacagacaagctgtcccgcttcccggccctcctcctccc
cccccccctgcgtcctcggccataagcacagagcgcatgccctcgtctagccttgacctc
tatgagcgaaatccccttgctcctcctcaggctccgggttcttcgtactacggccgtgat
aggagcccaattcgaaggctccccctcgaggtggaaggatacgcgtatgatcgtgcgcat
gtcgcccccatctcttcgcttcctcggagctctgcgtttgacatgccgcgggatccttac
gccgaccgggcacgctatgcgtattaa
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