KEGG   Ictalurus punctatus (channel catfish): 108267459
Entry
108267459         CDS       T04658                                 
Symbol
rbm4.1
Name
(RefSeq) RNA-binding protein 4.1
  KO
K13187  RNA-binding protein 4
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108267459 (rbm4.1)
Spliceosome [BR:ipu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    108267459 (rbm4.1)
SSDB
Motif
Pfam: RRM_1 zf-CCHC RRM_5 RRM_7 zf-CCHC_3 RRM_occluded zf-CCHC_2 Calcipressin zf-CCHC_5
Other DBs
NCBI-GeneID: 108267459
NCBI-ProteinID: XP_017327019
Ensembl: ENSIPUG00000022931
UniProt: W5U754
LinkDB
Position
7:23168910..23172792
AA seq 428 aa
MVKIFVGNLSPNTTTDELRSLFSQYGKISECDIVKNFGFVHMENKAEAEEAIRNLHHYML
NGLAMNVEMSRGKPKASTKLHVGNISSSCTNQELRAKFEEFGPVVECDIVKDYAFVHMER
VEDAMEAIRGLDNTAFQGKLMSVKLSTSRLRTAPGMGERTGCYRCGQEGHWSKECPLDQN
GSYREGQGSEGYGAPRFGTSGGGGDRGFQQGFNGEPSFGSNYGPVQGFSRGTGYGGPGYG
RGMGTGMGTSTSTGTGYNGAMSFGVAAGYGMGATYGSEAAYSSGVSYGSAVPGFPARRAS
YDERDPYGVVDYYEKYRARPYGGNYFDDRQAVPLPGPPPPPPPASSAISTERMPSSSLDL
YERNPLAPPQAPGSSYYGRDRSPIRRLPLEVEGYAYDRAHVAPISSLPRSSAFDMPRDPY
ADRARYAY
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggtcaaaatcttcgtagggaacctttccccaaacacaactacggacgagcttcggtcc
ttgttctcccagtatggtaaaatatccgagtgcgacatcgtgaagaacttcggcttcgtc
cacatggaaaacaaagccgaggctgaggaagccattcgcaaccttcaccattatatgctc
aacggtctagccatgaatgtggagatgagccgagggaaacccaaagcctccaccaagctc
cacgtaggcaatatcagtagtagttgtaccaaccaagagctgcgggccaagtttgaagag
tttggccctgtggttgagtgtgacatagtaaaggattatgcctttgtccacatggagcgg
gtagaggatgcgatggaggccatccgaggcctagacaacacggcatttcaaggcaaactg
atgagcgtgaagctttcgactagccgcctgcgtacagcgccgggaatgggagagagaacg
ggttgttatcggtgcgggcaggaaggccactggtccaaagagtgcccactggaccagaac
ggctcctatcgtgagggccagggctcagagggatatggcgctccccggttcggtacgagt
ggcggtggtggtgatcgcggtttccaacagggcttcaatggcgaaccgagctttggcagc
aactatgggcctgtgcaaggcttctcccgtggtactggttatgggggtcctgggtatggc
aggggcatgggcacaggcatgggaacgagcacaagcacgggcacgggctataatggtgcg
atgagtttcggtgtcgcggcgggatacggcatgggcgcgacgtacggcagtgaggcggca
tacagcagtggcgtcagctacggcagcgcggtgcccgggttccctgcgcggcgagcgtcc
tatgatgaacgggatccgtacggggtggtggactactatgaaaagtatcgtgcgcgtccc
tatggaggcaattattttgatgacagacaagctgtcccgcttcccggccctcctcctccc
cccccccctgcgtcctcggccataagcacagagcgcatgccctcgtctagccttgacctc
tatgagcgaaatccccttgctcctcctcaggctccgggttcttcgtactacggccgtgat
aggagcccaattcgaaggctccccctcgaggtggaaggatacgcgtatgatcgtgcgcat
gtcgcccccatctcttcgcttcctcggagctctgcgtttgacatgccgcgggatccttac
gccgaccgggcacgctatgcgtattaa

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