Ictalurus punctatus (channel catfish): 108267464
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Entry
108267464 CDS
T04658
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2
KO
K15516
fragile X mental retardation protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108267464 (fxr2)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108267464 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
108267464 (fxr2)
mRNA cycle factors
Stress granule specific factors
108267464 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
108267464
NCBI-ProteinID:
XP_017327032
Ensembl:
ENSIPUG00000022953
UniProt:
A0A2D0R8X4
LinkDB
All DBs
Position
7:23111600..23130095
Genome browser
AA seq
660 aa
AA seq
DB search
MDGLPVEVRGSNGAFYKAFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPSDYHKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPVNPNSP
STRNSFYKTTIAVPEDLREICLSDNIHKDFRKAIGANCIFYNTSSHELVVLSTNDSTVKR
ASLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARVYLEFKEDSFQVPRNLVGKVIGKS
GKIIQEIVDKSGVVRVRIEGDNEKKLPREEGMVPFIFVGTKENISNAQALLEYHVAYLQE
VEQLRLERLQIDEQLRQIGVGYRGAPNRSGAPGAGDRERGYQTDESSNSLQTSRTYGGRG
RGRKSNNAYSGYGTNSELSNASESEDLAERDPRPRGVGGDERGSRRGGRGRGSSTGRGRG
GPGSRSSNTISSVLKDPDSNPYSLLEGEGDLGGDTDASESMGGNDRRRRSRRRRNDQEPS
VIDAANESDGQAATSENGLDDDGKPQRRNRSRRRRNRATRPEGGSASRDRQPVTVADFIS
RAESQSRQNLPVKKEEIQHASHPKENGTSVKKEEHTPSKRSPSNGVASSGETLTLVNGVS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctgcctgtggaggtgcgcggctctaacggggccttctacaaggcattcatc
aaagatgtccatgaagactccctcacaatagtttttgagaacaactggcaaccagagaga
cagctaccattcagtgatgtgaggttgccacccccatccgactaccacaaggacatcggt
gagggagaggaagtggaggtgtactcccgagcaaacgaacaagaaccttgcggctggtgg
ctggcgagggtgaggatgatgaagggcgagttctatgtaatcgagtatgctgcatgcgac
gccacatacaacgaaatagtcacatccgaaagaatccggcctgtcaaccccaacagccct
tccactcgcaactccttctacaaaactaccatcgctgtgcccgaggacctcagagaaatc
tgcttaagtgacaacatccacaaagacttcaggaaagcaatcggggccaactgcatcttc
tacaacacttcatcacatgagctggttgtactgtccacaaatgactcgacagtgaagcgt
gcctcccttctgagtgacatgcatttccgcagcattcgcaccaagctcatgctcatgtct
cgcaacgaggaggccaccaaacaccttgagacgagtaaacagctggcatcagcctatcag
gaggaggtacgggtgcgggaggatttgatgggtttggccatcggctcccacggcgccaac
atccagcaggcacgcaaggttcctggggtcaccgccattgagcttgaggaggagagctgc
accttcaggatctacggagagacccccgaagctgtgaaacaggctagagtatatctagag
tttaaagaagactccttccaggtacccaggaatcttgtaggcaaagttattgggaaaagt
ggcaaaatcatccaggaaattgtggacaagtctggtgtggtgcgtgttcggatcgaaggg
gacaacgagaaaaagctgcccagagaggagggtatggttcccttcatctttgtaggaacc
aaagaaaacatcagtaatgcccaagccttgctggagtaccatgtggcctacctgcaggag
gtggaacagttgcgtctggagcggctgcagattgatgagcagcttcgtcagatcggtgtt
ggttaccgtggcgccccaaaccgctccggggcacccggagctggagaccgtgagagggga
taccagactgacgagagcagcaactctctacagacctcccgcacgtacggtggacgaggt
cgtgggcgcaagtccaacaacgcatactctggttatggaacaaactctgagttgtccaat
gcgtccgagtcagaggatctggctgagcgggatcctaggccccggggagtgggaggtgat
gagaggggctcccggagaggaggtcgtggccgaggatccagcacaggcagaggccgtgga
ggcccaggatcccgcagctcgaacacaatcagctcagtgctcaaggaccctgacagtaac
ccctactccctgctggagggtgaaggtgatctgggtggagacaccgatgccagcgagagc
atgggcggcaatgaccgccgtcgccgttcccgccgtcgccgcaacgaccaggagcccagt
gtgattgatgccgccaatgaatcggatggccaggcagctactagtgagaatggattggat
gatgacggcaaaccccagaggcgcaacagaagccgccgtcgccgtaatcgtgccacccga
ccagaggggggctctgccagccgtgacagacagccagttactgtggccgacttcatctct
cgtgcagaatctcagagcagacagaaccttccagtgaagaaagaagaaattcaacatgcc
tcccatcctaaggagaatgggactagtgtgaagaaggaagagcataccccgtccaagcgt
tcccctagcaatggtgttgcatcatctggggagactctgaccctggtgaatggcgtttcc
taa
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