Ictalurus punctatus (channel catfish): 108267511
Help
Entry
108267511 CDS
T04658
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108267511 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108267511 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108267511 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
Ig_J_second
Ig_CD22
Receptor_2B4
C2-set_3
Glyco_hydro_39_C
Motif
Other DBs
NCBI-GeneID:
108267511
NCBI-ProteinID:
XP_017327111
Ensembl:
ENSIPUG00000015512
UniProt:
A0A2D0RAH7
LinkDB
All DBs
Position
7:complement(12523882..12564460)
Genome browser
AA seq
1583 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRAYRSREAESTISQYQQSSSAYSAHRTNTKGIRDSTFTSLDGMG
ERSNPTYLAVDKGNQIIGYVVPIFRGSQEFASGLSDTEEARAKQSAGYLARRDLFTSGVE
MERVEHKSRRTVMRESAERISLTKRIHDNEEYHKRLNEDHLMRSPEFVIKPRSHTVWEKQ
CVRLHCTVSGWPEPRIVWYKNNVTIDPMAHPGKYKLVSSYNVHSLEINKCDFDDTAQYRV
SAMNSKGELSAFASVVVKRFKGEVDESLPAPRLYKKWSSSEVPCLEYGLTFETHIVEKFG
VSFGREGETMSLGCSVIIYPSLQRFQPEIEWYRDDKLLVPSKWIQMHWSGDRATLTLTHL
NKEDEGLYTLRVITKSGYETHSAYVFVRDTDAEVAGAPGAPLDVFCQEANKDYVIVTWKQ
PAVDGGSSILGYFVDRCEVGTSHWIQCNDTPIKFARFPVTGLVEGRSYIFRVRAVNKCGM
SHPSRVSEPVAAMDPADRARKGASAPWTGQIIVTEEEPVEGVVPGKPRDLTVIEATKNYV
VLSWKPPGDKGYEGVMYYVEKCVSGTDSWQRVNTELPVKSPRFALFDLSEGKSYCFRVRC
CNSAGVGEPSDPTEAIQVGDKLDIPSAPGRVVPTRNTDTSVVVSWEASREAKELVGYYIE
TSVSGSNAWDPCNNKPVRATRFVCHGLTTGEKYVFRVRAVNAAGISEFSQESESIEVKAA
IGGGIPHASPAPPYGISVLESVRDSMVLAWKQPTFIGGADITGYFVDYREVISGVPGKWH
EANIKAVSERAYRVSDLKENMFYQFQVRAANMAGVGIPSLPSQTFKCEEWTIAVPGPPHD
LQVLEVRKDSLVLLWKPPVYQGRDKVNGYYIDIKEADADFEKWRGVNEKATSKTYMKIKD
LKEGVSYVFRVRAQNKAGVGKASEETEPVLAETKPGTMELVVDVDDEGVISMNFECHNLT
AESKFIWSKNYEEMKDSNRLTMETKGNKSKAIFNSPSEEDLGIYSCAVTHTDGVSASYTL
TEEGLKELLKISHDHKFPIIPLKSELGVQLLEKGRVRFWLQAEKISANGKVEYVFNDNLI
SQGEKYKMNFDKNTGIIEMFMESLGKEDEGTYTFQLQDGKATNQSSLVLIGEVFKQLQKE
SEFQRKEWHRKQGPHFVEYLSYEVTPECIVRLKCKVGNMKKDSVALWYKDGREIKASEKL
DFSEGVLTLEITKISKKDAGVYEVIVKDDRGQDKSTLNLTDQGFKDLMNQVFSVIANSST
LLKIQSTEEGIRLYTFVNYYNDELLVTWQHKDSAITFTDRIKSGVVGEQLWLQISEPTEK
DKGKYAIEFFDGKGGLKRTIELAGQAYDDAYAEFQRLKAAAIAERNRARVAGGLPDVVTI
QEGKALNLTCNISGDPVPEVTWLKNEREMVSDDHYVLKFESGKFASFTITTVNTSDSGKY
SILVKNKYGTESGDFTLEVTENMGDLGVVSYLTDDHGNVVIGPTACSSKPPTPNKSKPAT
STQPSPKPASTTLFSPTSTSPSEEKPKKKATDEKKREKKKVMKRKESVILKIPTGEAESH
DPTPTTTPVTPGTETMLLHDPGC
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatcgatcccgttctaccagaagcaccaccgtcactatgaccgtgcctaccgt
agccgggaggcggagtccacaatcagccagtaccagcagagctccagtgcttactccgcc
cacagaaccaacacaaaaggcatcagagattccacctttacctctctggatgggatgggg
gagagatccaatcccacctacctggctgtggacaaagggaaccagattataggctatgtg
gtgcccatcttcaggggaagtcaagagtttgcgagtggtctgtcagacactgaagaggct
cgggctaaacagagtgctggttacctggcgcgcagggacctcttcaccagtggggtggag
atggaacgcgtggaacacaagtctcgcagaaccgtcatgagggagtccgcagagcgcatt
tccctcaccaagaggattcatgacaacgaagagtaccacaagcgcctgaacgaggatcac
ctgatgcgttccccagagtttgtgatcaagccccgctcgcacactgtgtgggaaaaacag
tgtgtgcggctacactgcacggtttcaggatggcctgagccccggattgtgtggtacaag
aacaatgttaccattgacccaatggctcatcctgggaagtacaaactagtgagcagctac
aatgtccactctctggagattaacaaatgtgactttgatgacactgcccagtatcgtgtg
tctgccatgaacagcaagggggagctttcagcttttgcctctgtcgtggtcaaacgattc
aaaggggaagttgatgagtctctcccagctcccagactctataagaaatggtccagctct
gaagtgccctgcctggagtatggattgactttcgaaacacatattgtagagaagtttggt
gtgtcttttggacgtgagggtgagacaatgagtctgggctgctctgttatcatctaccca
tcattgcaacgcttccagcctgagattgagtggtacagagatgataagttgctggtgcca
tctaagtggattcagatgcactggagtggggacagagctactcttacactcacacacctc
aataaagaagacgaggggctttacactctccgagtcatcacaaagtctggctatgagaca
cactcagcctatgtctttgtccgagataccgacgcagaggttgcaggggctcctggtgct
cccctggatgtgttttgtcaagaagctaataaagattatgtcattgttacatggaaacag
cctgctgtggatggaggcagctccattctgggatactttgtagacaggtgtgaagttggc
acatctcactggattcaatgcaatgatactccaatcaagtttgcccgttttccagttact
ggactcgttgaaggccgcagctatattttccgtgtgcgtgcggtgaataagtgtggcatg
agtcatccttctcgagtgtctgaacccgtggcggccatggatcctgctgaccgtgctcgc
aaaggtgcctctgcaccttggactggccagatcattgttactgaggaagagcctgtagag
ggtgtggttcctggcaaacctcgtgacctcacagttattgaggccaccaagaactatgtg
gttctgagctggaagccgccaggcgacaagggatatgagggtgtcatgtactatgttgag
aagtgtgtgtctggcacagacagctggcaacgtgtgaacacagagcttccagtaaagtct
ccacgctttgctttatttgacttgtctgaggggaaatcttactgcttccgtgtccgctgc
tgtaactctgctggcgtcggtgaaccttcagaccccacagaggccattcaagtgggagat
aaactggatattccatctgccccaggccgggtagtgccaacccgaaacacagacacatct
gtcgttgtgtcatgggaggcatcacgggaggctaaagagctggtgggctactacattgag
accagtgtttctggaagcaatgcttgggatccctgcaacaataagcctgtcagagccacc
agatttgtgtgtcatggcttgacaacaggtgaaaagtatgttttccgtgtgagggcggtt
aacgcagccggaatcagtgagttctcacaggagtctgagtccatcgaagttaaagctgct
attgggggcggtattcctcatgcctcccctgctccaccctatggcatttccgtgttggag
agtgtaagggattctatggtgctggcctggaagcagccaacattcattggtggtgctgac
atcactgggtactttgtggattatcgtgaggtcatcagtggagtacctggaaaatggcat
gaggccaacattaaggcagtcagtgagagagcctacagggtctctgatctgaaggagaac
atgttctaccagttccaggttcgtgctgcaaacatggctggtgttggcatcccatctctg
cctagtcagacctttaaatgtgaagagtggaccattgctgtgccaggtcccccacatgac
cttcaagtcctggaagtacgtaaggactctttggtgttgctctggaaaccaccagtgtac
cagggtcgtgataaggtcaatggctattacattgacatcaaggaggctgatgcagatttt
gagaaatggagaggagtcaatgagaaagctacaagcaagacatacatgaagattaaggac
ctgaaagagggagtgtcttatgttttccgtgtacgagctcagaacaaagctggtgtgggc
aaagcatctgaagaaacagagccagtgttggctgagactaaaccaggaactatggagttg
gttgtggatgttgatgatgaaggtgtgatttcaatgaacttcgaatgtcataatctcact
gctgaatccaagttcatctggtccaagaactatgaggagatgaaagactctaaccgtttg
accatggagaccaagggcaacaagtccaaagcgatctttaactctccttctgaggaggac
ctgggtatctactcctgtgctgttactcacactgatggagtctctgccagctacaccctg
actgaggagggcctgaaggagctgctgaagatcagtcatgaccacaaattccccattatt
cctctgaaatcagagttaggtgtgcagttgttagagaaaggtagggttcgtttctggctg
caggctgagaagatttctgctaacggcaaagttgaatatgttttcaatgacaacctgatc
tctcagggagagaaatataagatgaactttgataagaatactggtatcattgagatgttt
atggagtcactggggaaagaggatgaaggaacctacactttccaactccaggatggcaaa
gccaccaaccagtccagcctggtacttataggagaagttttcaaacaattgcaaaaagaa
tccgagttccagaggaaagaatggcacaggaaacaaggtcctcattttgtggagtatcta
agttacgaggtcacacccgagtgcattgtgagactgaagtgcaaggtgggtaacatgaag
aaggactctgtagcattgtggtataaggatggaagagagataaaggccagtgagaaactg
gatttctctgagggagtgctgacactggagattactaagatctctaagaaggatgcgggt
gtgtatgaggtgattgtaaaggatgacagaggccaagacaaatccacacttaacctgact
gaccaaggattcaaggacctgatgaaccaagttttcagtgttattgcaaactcttccact
ctactgaagatccagagcactgaggagggcatccgcctgtacacattcgtcaattattac
aatgatgaactgctcgtcacctggcaacacaaggattctgccattacctttactgatcga
attaagagtggtgtggtgggtgagcagttgtggctgcagatcagtgaaccaacagagaaa
gacaagggcaagtatgccatcgagttctttgatgggaaaggaggactgaagaggacaata
gagctggctggacaagcatatgatgatgcttatgcagaattccagcgactgaaagctgct
gccattgcagaacgaaatcgggctcgtgtggcaggaggtttgcctgatgtagtaaccatc
caggagggcaaggccctgaatctgacatgtaatatctcgggagaccccgtgcctgaggtg
acctggctgaagaacgagagagagatggtgtctgacgaccactatgtcctcaagttcgag
tctggcaagtttgcgagcttcaccatcaccaccgtgaacacaagtgactcgggaaaatat
agcatcttggtgaagaacaagtacggcacagagagcggcgacttcaccttggaagtcacg
gagaacatgggtgatctgggtgtggtttcatacctgaccgatgatcatggcaatgtggtg
attgggcccacagcatgttcatctaagcctccaacaccaaacaaatcaaaaccagctaca
tctactcaaccaagtccaaagcctgcatccacaacacttttctctccgacatcaacctcc
ccatcagaggagaaacccaagaagaaggcaacagatgagaaaaagagggagaaaaagaaa
gtgatgaagaggaaagaatctgttattctgaaaatccctactggagaggcggaatcacat
gatcccacccccacaacaacacctgttacacctggaacagaaaccatgcttctccatgat
ccagggtgttga
DBGET
integrated database retrieval system
