Ictalurus punctatus (channel catfish): 108267512
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Entry
108267512 CDS
T04658
Symbol
gsdmeb
Name
(RefSeq) gasdermin Eb
KO
K22146
gasdermin-E
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
108267512 (gsdmeb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108267512 (gsdmeb)
Transporters [BR:
ipu02000
]
Other transporters
Pores ion channels [TC:
1
]
108267512 (gsdmeb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
108267512
NCBI-ProteinID:
XP_017327120
Ensembl:
ENSIPUG00000003382
UniProt:
A0A2D0RB80
LinkDB
All DBs
Position
1:14707794..14723978
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AA seq
484 aa
AA seq
DB search
MFAKATRKFVDAIDPDGCLIPVSRLNESDNLTVSSLVIKRNPYWCWQQPRYIPTDFTLND
VLLGERPISPVLVETDFLNYNGTVENNTAGGAEAGVGPGNLNIEGKGSTKIASSFGRLKK
QEVDVQKLLCDSKERRLDFQHSLLKQTLQRQREVFALVKERIITTQTCMVIEQVHGGGSC
SAFLGFTVPKKIQVSVKNGTVNSDSNVVLEIPANTALAYSLMELNVRSTGQFDLCLMPDS
YGCFEVDSLHKSKPNLLFSAPCEPSIQKLRNDFENLQVQFKVLSGLPASTRSFLFQQITL
LLKDKTAISSLNLALENLLCGRKSDFSTLDKVPSLKKAIQTTLELLKEKEDADHAPLETV
PLEQQMEPSALTATNVLTSALEEMTESSLSALESCCDHPTLQAMHLLVQNVMENKECFLK
DSTLAPLAEKDTYSKVQELFGSSSVMLSKEEDLIKAQISSQQGHSPLILCIAIFGLASLA
SPTD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaaagcgaccaggaaattcgtggatgcgattgaccccgatggctgtttaatc
cccgtctcccggctgaatgaatcggataatttgacggtttcctcgctggtcatcaagcgg
aatccctactggtgctggcagcaacccagatacattcccacagacttcaccctgaacgat
gtgctgctcggggaaaggcccatcagtccagttctggtcgagacagactttttaaactat
aatggtacagtggaaaataacacagctgggggagctgaagcaggtgtcggtcctggaaac
ctgaacatcgaaggaaaaggttcgaccaaaatcgcatcctcatttgggagacttaagaag
caagaagtggatgttcagaagctactatgtgactctaaagagagacgtctggattttcag
cactccctgttgaagcagacactgcagcggcagcgcgaggtgttcgcgctggtaaaggag
cgaatcataaccacacagacctgcatggttattgagcaagtacacgggggaggaagctgc
tcagcctttcttggattcactgttcccaagaagattcaggtttcggtaaagaatggcacc
gtcaatagtgacagcaacgttgttctagaaatcccagctaacacggccctggcttacagt
ttaatggagctcaacgtgagaagcacaggtcaatttgatctgtgcctgatgccagacagc
tacggatgctttgaggtggacagcctgcacaaatcaaaaccaaacctgctcttcagtgct
ccatgtgaaccatcaatccaaaagctaaggaatgactttgaaaatttgcaggttcagttc
aaggtgctttcaggactccctgctagcacacgctcatttctcttccagcaaatcactctc
ctcctgaaggacaagacagccatcagtagcctgaaccttgcattggagaatttgctttgt
ggtagaaagtctgatttctccacattggacaaagtgccctctctgaagaaagcaatacag
actacgttggagctgctcaaggagaaagaagatgcagatcatgccccattggaaacagtc
cccttggaacaacagatggagccctctgccctcactgccacaaacgtcctcaccagtgcc
ttagaggagatgactgagtcgagcttgagtgcactagagtcctgctgcgatcaccccacc
ttacaggcaatgcacctgctggtacaaaatgttatggaaaacaaagagtgcttcttgaag
gatagcacacttgccccattggctgaaaaggatacttacagtaaagtacaggagctcttt
ggatcttccagtgtgatgctgtccaaagaggaggacttgatcaaggcccagatcagcagc
cagcaggggcactctcctctaatcttgtgcatcgccatctttggtttggcctcgttagcg
tccccaactgactaa
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integrated database retrieval system
