Ictalurus punctatus (channel catfish): 108267532
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Entry
108267532 CDS
T04658
Name
(RefSeq) actin-binding protein IPP isoform X1
KO
K13956
actin-binding protein IPP
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108267532
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108267532
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_1
Beta-prop_Calicin
BTB
Kelch_FKB95
Kelch_KLHDC2_KLHL20_DRC7
BACK
Beta-prop_ATRN-LZTR1
Kelch_2
NANM
Beta-prop_FBX42
BTB_KLHL33
Beta-prop_TYW4
BTB_SANBR
Rad4
BTB_3
BTB_2
Motif
Other DBs
NCBI-GeneID:
108267532
NCBI-ProteinID:
XP_053537180
Ensembl:
ENSIPUG00000006504
UniProt:
A0A9F7RAV2
LinkDB
All DBs
Position
7:34187079..34192133
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AA seq
615 aa
AA seq
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MSSTCQSRSAPPPGLSDITGTGKEDGSLRSSERHAHLLLAQMNKMRVQSELCDVRLLVGG
RVFQVHRLVLAASGPYFSALFNSAMSEAREEEVHIAGVEADVFESLLEFIYTGCVEVTVE
NVQDLMMAADMLQLGELVLICGEFLRSHVEPSNCVGIYQFLEQISYSELLEFTQNYIHAH
FLQVREEELRPLTVPLTPMCQVREEEEFSSLSKDQLACFLRSEELRIEDEYQVFTAAMSW
LLHDVTHRKKHVVEVLEPIRFPLLSPQRLYAYIEGVSDFSLRVALQTLLREYTETNKTPK
DPKTLVQPSKTRPRRKARKYLYAIGGYTRLQGGRWSDSRALSCVERFDSFSQFWTTVSSL
HQARSGLGVAVLDGMIYVVGGEKDSMIFDCTERYDPVTKQWAAVASLNFPRCGVGVCPCH
GALYALGGWIGSEIGKTMERYDPEENKWEVIESMPVPRYYFGCCELQGFIYVIGGISDEG
VELRSAEVYDPISRRWRALPVMMTRRAYVGVASLNNAIYAVGGWNEALGSLDTVEKYCPE
EERWVEVASMSMARAGVSVAAVNGLLYAIGGRNSGRDFSAPVTVDSVEIYDPHLDTWTEI
GNMITSRCDGGVAVL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaacctgccagtcacgctcagccccgccccctggactgagtgacatcacaggg
acaggcaaggaggacggttctctccgttcttcggagcgccatgcccacctgctgctggct
cagatgaataagatgcgtgtgcagtcggagctgtgtgacgtgcgtctgctggtaggcgga
cgggtgtttcaggtccaccggttggtcctggcggccagcgggccgtatttctccgccctc
tttaactcggccatgagcgaggcacgtgaggaggaagtgcacatcgccggggttgaggca
gacgtgtttgagtctctgctggagttcatatacacaggctgtgtggaggtgacggtggag
aacgttcaggatctcatgatggcggccgacatgctgcagctcggcgagctcgtgctcatc
tgtggagagttcctgaggagccacgtggagccgagtaactgtgtaggaatttatcagttc
ctggaacagatcagctacagcgagctcctggagttcacgcagaactacatccacgcccac
ttcctacaggtgcgtgaggaggagcttagacccctgactgtgcctttaacgcccatgtgt
caggtgcgtgaggaggaggagttctccagcctgtcgaaggatcagttggcgtgtttcctg
cgcagtgaggagttgaggatcgaggacgagtatcaggtgttcacggcggccatgagctgg
cttctgcacgacgtcacacacagaaagaaacacgtggtggaggttctggagccgatccgc
ttccccctgctgtcaccgcagagactctacgcttatattgagggcgtgagtgacttcagc
ctgcgggtggcgctgcagaccctgctgagagaatacacagagacaaacaaaacccccaaa
gaccccaaaacacttgtacaaccgtcaaagacccgcccccggaggaaagcgcgcaaatac
ctctacgccatcggaggttacactcgcctgcagggagggagatggagtgacagtcgggcg
ttgagctgtgtggagcgatttgattcgttcagtcagttctggacgacagtctcctccctc
catcaggcccgcagcgggctgggcgtcgctgtcctcgacggcatgatctacgtcgtcgga
ggtgagaaggactcgatgatcttcgactgtacggagcgctacgaccccgtcaccaaacag
tgggctgctgtcgcttccctcaacttcccacgctgtggagtcggggtgtgtccgtgccac
ggagctctctatgcactcggcggctggatcggttctgaaatcgggaagacgatggagcgt
tatgatccggaggagaataagtgggaggtgatcgagagcatgcccgtaccacgctactac
ttcggctgctgtgagctacaaggtttcatctatgtgattggtgggatcagcgatgagggg
gtggagcttcgttcagccgaggtctacgaccccatttcccgccgctggcgagcgctgccc
gtcatgatgacgcggagggcgtatgtgggcgtggcttcgctcaacaacgccatctacgcg
gtgggggggtggaacgaggctctcggctcgctggacaccgtggagaaatactgtcctgag
gaggagcggtgggtggaggtggcgtccatgtcgatggcacgcgccggtgttagcgttgcc
gccgttaacgggctgctgtacgccatcggaggccggaactcggggcgggatttctccgct
ccagtcactgtggactcggtggagatttacgacccgcacctggacacgtggactgagata
ggaaacatgatcaccagccgctgcgatgggggcgtggctgtgctctga
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