Ictalurus punctatus (channel catfish): 108267535
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Entry
108267535 CDS
T04658
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
ipu04110
Cell cycle
ipu04114
Oocyte meiosis
ipu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108267535
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108267535
04114 Oocyte meiosis
108267535
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108267535
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108267535
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108267535
03036 Chromosome and associated proteins [BR:
ipu03036
]
108267535
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108267535
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108267535
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108267535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
108267535
NCBI-ProteinID:
XP_047012842
Ensembl:
ENSIPUG00000003987
ENSIPUG00000003996
UniProt:
A0A2D0R9B1
LinkDB
All DBs
Position
7:complement(17807381..17835278)
Genome browser
AA seq
503 aa
AA seq
DB search
MDQPTKLPPSSPSSPTAAFSVPSAEKVDGFPRRSMRRARQRRSHSSSQFRYQSSQVELTA
LPLLKDAPVAELHDLFCKKLQQCCVLFDFLDCVADLKGKEIKRAALNELVESVATSRGIL
IEPLYPEAIKMISVNIFRTLPPSENPEFDPEEDEPTLEASWPHLQLVYEFFLRFLESPDF
QPSMAKRYVDQKFVLQLLELFDSEDPREREYLKTILHRVYGKLLGLRAYIRKQINNIFLR
FIYETEHFNGVAELLEILGSIINGFALPLKSEHKQFLVRVLIPLHTAKSLSIFHAQLAYC
VVQFMEKDATVTEYIIRGLLKYWPKTCTQKEVMFLGEIEEILDVIEPSQFSRVQEPLFKQ
IASCISSPHFQVAERALYFWNNEYILSLIEENCQVILPLVFGTLYRVSKEHWNQTIVSLI
YNVLKTFMEMNSKLFDDLTASYKVEKQKELKREKERAELWKGLEEQQERRLQSLGEASRN
QKNLQERENLSKNEPESSAASAT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcccaccaagctgcccccgtcgagtccatcctcacccaccgcggccttctct
gtgcccagtgctgagaaggtggatggctttccacgccgctccatgcgcagagcccgccag
agaaggtcacacagctcgtcgcagttccgttatcagagctcgcaggtggagctcacagct
ctgcctctgctcaaagatgccccagtggcagagctgcatgatctgttttgtaagaagctg
cagcagtgctgtgtgctctttgacttcctggactgtgtggctgacctgaaagggaaagag
atcaagcgtgcggcgctaaatgagctggtggagagcgtggctaccagccgtggcatcctt
attgagcccctctatcctgaggccatcaagatgatttcagtgaatatcttccgtactctg
ccgcccagtgagaacccagagtttgatccagaggaggatgaacccacactggaggcctcc
tggccccatttacagttggtctatgagttctttttgcgcttcttggagagtcctgatttc
caaccttccatggccaaacgttatgtggatcagaaatttgttctgcagttgctggagctg
tttgatagtgaggatcccagagagagggaatatctgaagaccatactgcatcgtgtctat
ggcaaactgctcggcctcagagcgtacatccggaaacagatcaacaacattttcctcagg
ttcatttatgaaactgaacacttcaatggagtggctgaactgctagagattttgggcagt
atcattaatggctttgcgctgcctctgaagtcagagcacaagcagttcctggtgagggtc
ctgatccccttacacactgccaaatctctgtccatctttcatgcacagcttgcctactgt
gtggtgcagtttatggagaaagacgccactgttacagaatacatcatcagagggttgctg
aaatattggcccaaaacatgtactcagaaagaggtgatgttcctgggggaaattgaggag
attctggatgtgattgagccatcacagtttagccgtgtgcaagagccactttttaagcag
atcgccagctgcatctccagcccccacttccaggttgcagagcgggctctgtatttctgg
aacaatgagtatattctgagtctgatcgaggagaactgtcaggtcatcctgcctctggtc
tttggcacgctttaccgagtctccaaagagcactggaaccaaactattgtgtcactcatt
tacaacgtcttgaagacctttatggagatgaatagcaagctttttgatgaccttactgcc
tcctacaaggtagagaaacagaaggagctgaagagggagaaggagcgtgctgagttgtgg
aaggggctggaggagcagcaggagcggaggctgcagagtctgggggaagcgagtcgcaac
caaaagaacctgcaagagcgagagaacctgagcaagaacgagccggagagcagcgctgcc
agtgccacctag
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