Ictalurus punctatus (channel catfish): 108267581
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Entry
108267581 CDS
T04658
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108267581 (ubtfl)
03021 Transcription machinery [BR:
ipu03021
]
108267581 (ubtfl)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
108267581 (ubtfl)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
108267581 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
VKGC_lumenal_dom
DUF5870
Motif
Other DBs
NCBI-GeneID:
108267581
NCBI-ProteinID:
XP_017327290
Ensembl:
ENSIPUG00000002725
UniProt:
A0A2D0RBP0
LinkDB
All DBs
Position
7:5601960..5614643
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AA seq
756 aa
AA seq
DB search
MKHRRTRKPRKSNPQPHRFEGLSFCRSGQSHLDCVVMNGSSSVAGTQTGRIKLEPDVDVW
SKEDCLTLLERIRSLLPDGDTLKYKTTESHFDWDKVGFGNFTGVMCKQKWQKVSTEVRKY
RTMTELIVDAMEYVKNPYKGKKLKTHPDFPKKPLTPYFRFFMEKRAKYAKIHPEMSNLDL
TKILSKKYKELPEKKKLKYIQEFQREKESFEKNMARFKEDHPELIEERKKSDLPEKPKTP
QQLWYNHEKKTFMKLHPEVSQKELKEALRRQWSQLSDKKRLKWISKALELQKNYEDSLRA
YHEAHPDANSEEHVTQKSVLTKAERQLKDKFDGRPTKPPPNGYSLYCAELMVNMKDVPST
ERMVLCSKQWKMMTQKEKDMFQKRCEQKKKQYEIDLQRFLETLPEEERDRVLTEEKLGGS
KLSLVGAGGTFVTKSPSGKDRGRDSELDQWVHGLPKEKRDGKKKTQLPETPKTAEEMWQQ
SVIGDYLAKYRNDRKKAQSAMEATWKGMEKKEKIPWIKKAAEDQKRYEVQYRTVRELVEM
RTVPSGQGQRKPKFDGEPKKPPVSGYQMFSQELLTNGELNHFSLKERMVEIGKRWHKLSQ
SQKDKYKKQVEEQQLEYKAELDAWVKSLSPQERDVYKEFSSTKRKSTSKARGPGAKVRVT
KGKAVGARAAALGAGGGKRSMAYRVKQDTSDSEEEDDKTNSTDSEDEDDESSASTDSDDE
DDDEEDENDEDDDEDDEDQSDGSSSSSEDSSDSDSD
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacaggagaacgcgcaaaccacgaaaatcgaaccctcaaccccataggtttgag
ggtttgtctttctgcaggtcgggtcagagccaccttgactgtgtagtcatgaatggcagc
agcagcgtggctggcacccagactgggcgaatcaaactcgaaccagatgttgacgtgtgg
agtaaggaggactgcctgacgctgctagagaggattaggagtctgttgcccgatggagac
actttgaaatacaagaccaccgagtctcattttgactgggacaaagtgggctttgggaac
ttcaccggggtcatgtgtaagcagaaatggcagaaggtttccaccgaggttcggaaatac
aggacgatgacggagctcattgtcgacgcgatggaatatgtaaagaacccttataaagga
aagaaactgaagacacatcctgacttccccaagaagcccctcacaccctactttcgtttc
ttcatggagaagagagccaagtatgcaaaaatccacccagagatgagcaacctagatctg
accaagatcctgtccaaaaaatacaaagagctccctgaaaagaaaaagctcaaatacatt
caggaattccagagggagaaggagtcctttgagaaaaacatggcacggttcaaagaagac
catcctgagctgatagaagaacgaaagaagtcagacctcccggagaagcccaaaactcct
cagcagctgtggtacaaccacgaaaagaaaaccttcatgaagcttcacccggaggtaagt
cagaaggagctgaaagaagctttacggcgtcagtggtctcagctctcggacaaaaagcgg
ctgaaatggatcagcaaagcgctggagctgcagaagaactacgaggacagcttgcgggcg
taccacgaagcacacccagatgcaaactccgaagaacacgtcactcagaagtccgtcctg
accaaagccgagcggcagctcaaggacaagtttgacggacggcccactaagccaccgccg
aacgggtattctttgtactgtgccgagctgatggtgaacatgaaggacgtcccgagcaca
gagaggatggtcctgtgcagcaagcagtggaaaatgatgacccagaaagagaaagacatg
ttccagaagcgatgcgaacagaaaaagaagcagtacgagatcgatctccagaggttcctt
gagactcttccagaagaagaaagggatcgagtactgactgaggagaagctcggaggctcc
aagctgagccttgtgggtgcaggtggcacttttgtgactaagtccccatcaggcaaggac
cggggtcgagactccgagttggaccagtgggtccacgggctgccgaaggaaaagagagac
gggaagaaaaagacgcagcttcccgagacgcccaaaacggcagaggagatgtggcagcag
agcgtgatcggtgactacctggccaaatacaggaacgacaggaagaaagctcagagcgcc
atggaggctacttggaagggcatggagaagaaagagaaaattccctggatcaagaaggca
gccgaggaccagaagcgatacgaggttcagtaccggactgtgagagagctggtcgagatg
aggacagtgccatcgggtcaaggtcagaggaagccaaagttcgacggcgagcccaagaaa
cctcctgtgagtggctatcagatgttttcgcaggagctgctcacaaacggtgagttaaat
cacttcagcctcaaggagcgcatggtggagatcggcaagcgctggcacaagctcagccag
agccagaaggacaagtacaagaagcaggtggaggagcagcaactcgaatacaaagccgag
ttggacgcctgggtgaagtctctctctcctcaggagcgagacgtttacaaagaattctct
tctacaaaacgaaagagcacgtcaaaggcgcgaggtcccggagccaaagtgcgtgtcacc
aaggggaaggcggtaggtgcccgagctgcagcgctgggggccggggggggcaaacgttcc
atggcgtaccgggtcaagcaggacacctcagattcagaggaagaagacgataagacaaac
tcgacagactcggaggacgaagatgacgaatcctcggcttccacagatagcgacgatgag
gacgatgacgaagaggacgagaacgacgaggatgacgacgaagacgacgaagaccagtcg
gacggctcgagcagctcgtcggaggacagcagcgattcagattcagactaa
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