Ictalurus punctatus (channel catfish): 108267608
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Entry
108267608 CDS
T04658
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108267608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108267608
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108267608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
108267608
NCBI-ProteinID:
XP_017327342
Ensembl:
ENSIPUG00000020455
UniProt:
A0A2D0R9T9
LinkDB
All DBs
Position
7:complement(16262848..16285581)
Genome browser
AA seq
1030 aa
AA seq
DB search
MSQQGYVATPPYSQAQAVLGGYPTAFGAPPPQSHYGHYGAPPQSLPPQPTGMLKPAASSP
SGMLPPPASSQYGSPVQQNGAHLQTFPPPPAASAMSPYGQSPQRPYHSMAPTQQITNQMS
AMNIDGYAQSSMQTPQSLAAPQPFHMSPPPTMGHPPMSPPGTQPLSMATCPPMAANPPMS
ATGPPPMGLSNSRPHPPPLSGVGFQQPPAPQGFPPQQPGLYGGQMPGPPMAGPQPGAFPG
GFPGGPANMAGPPQKKLDPDSIPSTIQVIESDQAKRGGQVYTTNLRGQVPPLVTTNFTVQ
DQGNASPRFMRCTTYSFPCTSDLAKQWQVPLAAIIKPFATVPKNETPLYIVNHGEAGPIR
CNRCKAYICPFMLFIDGGRRFQCGFCSCINEVPVQYFQHLDHMGRRMDVYERPELSLGSY
EFAATLDYCKNNKPPNPPAYIFMIEVSYNNIKSGLVKLICEELKTLLERLPKEEGAESSA
IRVGFVTYNKILHFYNVNSALAQPQMMVVSDVTDMFLPLLDGFLVSFQESRAVINNLLSQ
IPDMFADTNESETVFAPVIQAGVEALKAAECSGKLFIFHSSLPTAEAPGKLKNRDDRKLV
NTEKEKTLFQPQRGVYEQLTKECVSQGCCVDLFLFPNQYVDLATMGDIPTHTGGSVYKYS
NFQVQIDGPHFLSDLRRDVEKSIGFDAIMRVRTNTGFRATDFFGAIYMNTTTDVEMAAVD
CDKAVTVEFKHDDALSEEAGALIQCAVLYTSVGGQRRLRVHNLSLNCSSQLSELYKSCET
DALINFFAKSAYHAILSQPVRTVREILVRQTAHMLACYRKNCATPSAASQLILPDAMKVF
PVYMNSLMKTPVLVGSTELSTDDRAFHRLSVMSMGVEESQVLLYPQLIPVHSMDVASDSI
PAAVRCSEERLSETSVFLLENGQSMFLWLGQACSPDLIQNLFNVPSMAHLSSDTTTLPEL
DTAHSRKLHSIICAISQQKCKSMKMVIVKQKDRSEMLFRQLLVEDKGLNGGTSYLEFLCS
VHREIRQLLT
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagggttatgttgctacacctccatactcgcaggcccaggcggtattgggg
ggataccccactgcattcggggctccccctccacaatcccattatgggcactatggagct
ccaccacagtcattacctccacaaccaacaggtatgctcaaaccagctgcctcatctcct
tctgggatgcttccaccacctgcgtctagccagtatggatctcctgttcaacaaaatggc
gcacacctacagacgttccctccccctccggcagcctctgccatgtctccctatggacag
tcccctcaaagaccataccacagcatggctccaacccaacaaataaccaatcagatgagt
gctatgaacattgatggatatgcccaaagctccatgcaaactcctcagtctttagcggca
ccgcagccttttcacatgtctccaccaccaacaatgggacatccacccatgtctcctcca
ggcactcaacctctctcaatggctacatgtccaccaatggcagctaatccacccatgagt
gcaacagggcctccgccaatgggattgtctaattcacggcctcaccctcctccgttgagt
ggagttggattccaacagccaccagcacctcagggatttcctcctcagcagccaggatta
tatggaggacagatgccagggccaccgatggcagggccacagccaggtgctttcccagga
ggcttccctggaggacctgccaacatggctggacctcctcagaagaaacttgatccagac
tccatacctagcacaatacaagtgattgaaagtgaccaggctaagagaggtggtcaggtc
tataccacaaatctcaggggtcaagtgccgcccctagtcacaaccaatttcactgttcag
gatcaaggaaatgctagcccaaggttcatgcgatgcaccacttattcatttccctgtacc
tctgaccttgccaagcagtggcaagtgcctctggcggccatcatcaaaccttttgccaca
gtgcccaaaaatgaaactcctctatacatagtaaatcatggtgaggcaggacccatacgc
tgtaaccgctgtaaggcctacatatgcccctttatgctcttcattgacggtggaagacgc
ttccagtgtggcttctgcagctgtattaatgaggttcctgtccagtatttccagcaccta
gaccacatgggccgaagaatggatgtatatgaaagaccagagctgtccctgggttcttat
gagtttgccgctacgctggattactgcaaaaacaataagcctcccaatcctcctgcttat
atcttcatgatcgaggtctcatacaacaacataaagagtggacttgtcaaattgatatgt
gaggaactaaaaacgctgctggaacgacttccaaaagaggagggagctgagagctcagcc
attagagtgggctttgtcacctacaacaagatcctgcacttctacaatgtgaatagtgca
ctagctcaacctcagatgatggtggtctctgatgtgacagatatgtttttgccccttctg
gatggattcctagtgagctttcaggaatcacgagctgtcatcaacaatctgttgagccag
attcctgacatgtttgctgacacaaatgaaagcgaaactgtttttgctccagttattcaa
gccggagtggaagcactgaaggctgccgaatgcagtggaaagctcttcatcttccactct
tccctcccaactgcagaggcacctgggaagctgaagaacagggatgacaggaagctggtg
aacaccgagaaagaaaagactctgtttcagccacagcgtggtgtgtatgagcagctgact
aaagagtgtgtgagccagggttgctgcgttgacctcttcttgttccctaaccagtatgtg
gatttggccactatgggtgacattcccacacacactggtggctcagtttacaaatatagc
aactttcaggttcagatagatggtccgcatttcctcagcgatctgagacgagatgtggag
aagtccatcggatttgatgccataatgcgtgttcgaaccaacacaggtttcagggccaca
gacttctttggtgccatctatatgaacacaactacagatgtggagatggctgcagtggac
tgtgacaaagcagttacagtggagtttaagcacgatgacgcactcagtgaggaggctggg
gctcttatacagtgtgctgtgctctacacctccgtcggtggtcagaggcggctgcgcgtt
cacaacctcagtctgaactgtagctctcagttatctgagctttacaagagctgtgagact
gatgcactcatcaacttctttgccaaatcagcgtaccacgctatactaagccagcctgtg
cggacagtgagggagatcctggtgaggcagacagcccacatgctggcctgctataggaag
aactgtgctacaccttctgctgcaagtcagctgatcctgcctgatgctatgaaagtgttc
ccggtgtacatgaacagcctgatgaagactccagttctggtgggcagcactgaactctct
acagatgaccgggctttccatagactcagcgtcatgtccatgggagtggaggagagccag
gtcctgctttacccacagctcattccagtgcactccatggacgtggcgagtgattcgatt
ccagcagcagtgcgctgctcagaggagcgtttgagcgagaccagtgtgtttttgctggag
aatggccagtctatgttcctttggctgggccaggcctgctctcctgatctcatccagaac
ctcttcaatgtgccctccatggcccacctcagttcagatacgactacattgcctgaacta
gataccgctcactctaggaagcttcactccatcatttgtgctatctcccagcagaagtgc
aagtccatgaagatggtgattgtgaagcagaaagacagatcagagatgctgttccgccag
ctcctagtggaggataaaggcttgaatggaggaacttcgtatttggaattcttgtgctct
gttcaccgtgagattaggcagcttctgacctaa
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