Ictalurus punctatus (channel catfish): 108267625
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Entry
108267625 CDS
T04658
Name
(RefSeq) far upstream element-binding protein 1 isoform X2
KO
K13210
far upstream element-binding protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108267625
03041 Spliceosome [BR:
ipu03041
]
108267625
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108267625
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108267625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
KH_KHD4_2nd
Motif
Other DBs
NCBI-GeneID:
108267625
NCBI-ProteinID:
XP_047012644
Ensembl:
ENSIPUG00000009896
UniProt:
A0A979EXP0
LinkDB
All DBs
Position
7:complement(10472816..10483198)
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AA seq
662 aa
AA seq
DB search
MADYGSVAPPSSNSGGGMNDAFKDALQRARQIAAKIGGDGVNPPPAANEFAYGGQKRPLE
DGDQPETKKVASDPFAAMGGMAGLPRPTSEEFKVPDGMVGFIIGRGGEQISRIQQESGCK
IQIAPDSGGMPDRCVTLTGSPDSILTAKRLLTEIVEKGRPTPFHHSDGPGMSVQEIMIPA
SKAGLVIGKGGETIKQLQHKILSSELQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQ
QAKDMVMDLIRDQGFREQRSEYGSRMGGSVGEGLDVPVPRFAVGIVIGRNGEMIKKIQND
TGVKIQFKPDDGTTPDRIAQIMGPPDRAQHAASIITDLLRSVQAGGPPGPGGRGRGRGHG
NWNMGPPGGLQEFSFTVPTVKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNIKM
FTVRGNPQQIDYARQLVEEKIGGPVSPMGGPHGPPGPHGGPAPHGPPGPPGPPAPMGPYN
PGPYNQGPSGPHGPPGPYQPQGWGNGYPHWQQQGQPDPNKAAADANAAAWAAYYAQYQQQ
PQPQAPMTPTAAAPGTAPSNGQGDPQAPGQSGQADYTKAWEEYYKKMGQPGQQPQDYTKA
WEEYYKKQGQAAPQAAGASSSQPGGQPDYSAAWAEYYRQQAAYYGQGASQPMGAAPPAQQ
GQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggccgattacgggagcgtggcgccgccgtcctcaaactccggcggaggaatgaacgac
gcttttaaagacgcgctgcagcgggcgagacagatagcagctaaaatcggaggcgatggc
gtgaatccaccccctgccgccaacgagtttgcgtatggagggcagaaaaggcctttggaa
gacggcgatcagccagaaacaaagaaagtcgcaagtgatccttttgctgcaatgggtgga
atggcaggtcttccaaggcctacatcagaggagttcaaggttccagacggcatggtcgga
ttcattatcggaagaggaggagagcagatttcaaggatacagcaggaatcgggatgcaag
atacagattgctccagacagcggcggcatgcctgatcgctgtgtgacgttaacgggctct
ccagattccatcctgactgcaaagaggttgctgacggagattgtggaaaagggcaggccg
actccgtttcaccacagtgatgggcctgggatgtcagtgcaggaaattatgatcccggct
tccaaagcaggcctcgtcatcggaaagggaggagagacgatcaaacagttacagcacaaa
attctgagttctgaattgcaggagcgagccggagtcaagatggtaatgattcaggacggg
cctcagaacaccggggcagacaaaccgctcaggatttctggggatccttttaaagttcag
caagctaaagacatggtaatggacctgatcagagaccagggtttcagagagcagagaagc
gaatacggatcccggatgggtggcagcgtaggagaaggtttggatgttcccgtgccgcgc
ttcgcagtggggatcgtgatcggcaggaacggcgaaatgatcaagaagatccagaacgac
acgggtgttaagattcagttcaaaccagatgacggcaccacgccagacaggatcgctcag
atcatgggtccccctgatcgggcgcagcacgcagccagtatcattacagacctgttgcgc
agcgtgcaggccggcggcccgccaggccccgggggcaggggcagaggtcgtggccacggt
aactggaatatgggcccaccagggggcctgcaggagttctccttcaccgttcccaccgtt
aagaccggtctcattatcggcaaaggaggtgaaacgattaaaagcataagccagcagtcc
ggcgcaaggatagagctgcagaggaaccctcctcccaacgccgaccccaatataaagatg
ttcactgtgcgtgggaacccacagcagatcgactacgccagacagcttgtcgaagagaag
atcgggggtcctgtcagccccatgggtggacctcacggaccaccggggccgcatggaggc
cccgcaccgcatggtcccccaggcccgcctggacctcctgcgcctatgggaccttacaat
cccgggccttacaaccaggggccttctggaccacatggtcctccagggccgtaccaacct
cagggctggggtaacggttaccctcactggcagcagcagggccagcctgatcccaacaaa
gcagcagcggatgctaatgcagcagcgtgggccgcctattacgctcagtaccagcagcag
ccccagccccaggcgcccatgacgcccaccgccgccgcccctggaaccgctccatccaac
ggtcaaggtgacccgcaggctccaggtcagagcggacaggcagattacaccaaggcctgg
gaagaatattacaagaaaatgggtcaaccaggccagcagccacaggactacaccaaagcg
tgggaggagtactataagaaacaaggtcaggcagctcctcaggcggccggggctagctcc
tctcagcccggaggccagccggactacagcgccgcatgggctgagtattaccgccaacaa
gcggcctactacggccagggcgcctctcagcccatgggagcagcaccaccggcccagcag
ggccagtaa
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integrated database retrieval system
