Ictalurus punctatus (channel catfish): 108267652
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Entry
108267652 CDS
T04658
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108267652 (sox19b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108267652 (sox19b)
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Paralog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
108267652
NCBI-ProteinID:
XP_017327428
Ensembl:
ENSIPUG00000005096
UniProt:
W5UD23
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All DBs
Position
7:16674554..16677890
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AA seq
294 aa
AA seq
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MMYSMMEHELKTQPGQQNPHPNGQIMSQHGGSGNVPQAAPKSACPPGVDPMDKVKRPMNA
FMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAAHMKEYPD
YKYKPRRKSKPPMKKDNSAAKYPPLPGGSLLAAAHAQSGSPRVDSYGWAPTGSYAAVQGD
ALAYQQQLHRYELPLQYAAPMSQSYMNGANSYSPMSYSSSPQQPSPVMSMVKPEAFTHSP
TGATNHHRGAVQGDLRDMISMYIPGGDVGDPTAQRGYPSVQQHYLGSTVPLTHI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacagcatgatggaacacgaacttaagacccagccgggtcaacaaaatcctcac
ccgaacggccaaatcatgtcgcaacacggcggctccggaaacgtgccacaggcggctccg
aaaagcgcgtgcccgcccggagtagaccccatggacaaagtgaagcggcccatgaacgcg
tttatggtgtggtcccgagctcagaggcgcaagatggcccaggagaacccaaagatgcac
aactcggaaatcagcaagcgcctgggcgccgagtggaaactgctgaccgacgctgagaag
cggccgttcatcgatgaggccaagcggctgcgcgccgcgcacatgaaggagtaccccgat
tacaagtacaagcctcggcgcaagagcaagccaccaatgaagaaggacaactctgcggcg
aagtatcctccgctccccggcggtagcctgctggccgcggcgcatgcgcagagtgggagt
ccgcgtgtggacagctacggctgggctccgactggaagctatgcggcggtacagggtgac
gctctcgcttaccaacagcaactgcaccggtacgagcttccgctccagtacgcagcgccc
atgtcgcagtcctacatgaatggcgccaactcctacagcccaatgtcatacagcagcagt
ccccagcagcccagccctgtaatgtctatggtcaagccagaggccttcactcactcgccc
actggagcaacaaaccaccatcgtggagcagttcaaggtgaccttagggacatgatcagc
atgtacatccctggcggtgatgtaggggaccctacagcacagaggggctacccaagtgtc
cagcagcactatctgggcagtactgtgccccttacacacatctga
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