Ictalurus punctatus (channel catfish): 108267702
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Entry
108267702 CDS
T04658
Symbol
arhgap21b
Name
(RefSeq) rho GTPase-activating protein 21 isoform X3
KO
K20315
Rho GTPase-activating protein 21/23
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108267702 (arhgap21b)
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Others
Others
108267702 (arhgap21b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108267702 (arhgap21b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
108267702
NCBI-ProteinID:
XP_017327528
Ensembl:
ENSIPUG00000012475
UniProt:
A0A2D0RAD7
LinkDB
All DBs
Position
7:complement(11609866..11650649)
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AA seq
1706 aa
AA seq
DB search
MATGWRNNEEEASYSVNAPLCEDVFEQKESPASMFQPEDEGFSWPGPKTVRLRRTALGFG
FTLRHFIVYPPESAVHSTYKDEDGDHRGRSRSRLEPMDTIFVKQVKEGGPAHGAGLCTGD
RIVKVNGESIIGKTYSQVIAVIQNSDTFLELSVMPKDEDILQLAYSQDAYLKSHHAYSGN
ARHIPKPPPICYPRVDCKPLGMAEATEITASGGLQSDLGYRVEIPVPPSPPPRIPKTQTA
VCVCNESVRTVVVPADVHMSHVVPGEYSHTGPDPMLMRTRSYVHPCKPDLYSPGYHGDSF
AVPPPRYHPSSSSASSASHQNIDWRTYQTYREYIDHKGLHTYSRTIQERLDSLRAAASQT
SSNFAQKATWGNKIRRRSMSHDRSFQGPPMLPPRSASQDRMTGAERMSRAQDWPPRSVSS
DGIIRNARFHSTDYVEHGEMALWPVDLRGYGRTEQGPRPNRQPVPQRPVIYPHSYGNNVR
GRSGPHQLSCRTDIPPPAVSSDRISRVGKNQPKEAQLCKDQRLLSNHVAVSVASLQSRTR
AETMQSPEPVKESSSSQRSTSCSVPTPQRQSQPGAPGQRVHPRDLKGLPVNGCSPVEGVV
MREKPTGGKSTPLRHPSYIQAQEHQDSLFGSANLNESLDSIPFIDEPASPSLDQEASHIS
ALAVMSTAQSAEADSPSSHTPSPQMRRQLSHDQESLRSAILEQSGTKTERSKSYDEGLDT
YREEGRRRSSKPSLKVFRKVLDGHKLSDDSSSRRDSSSDIFTDYFKEGWLHFRQLNTDKS
KRVGGGMRVWKQMYAVLRGHSVFLYKDRKEAHLHSQLDDEPQQVSIKACLIDISYSDTKR
KNVFRLTTSDCEYLFQAESRDDMLSWIRAIQENSNDENAGVTSTDLISRKIKEYISMSAP
TSKTEPSPKALRQSLSIKHTLLGVTAGKSQSTHSPRNEQDRSSKDDSSPPRDKAAWKRGI
PGLKKKQQEKKPTVGVMFGVRLDNCPPAHNNRFVPLIVEVCCKLVEERGLEYTGIYRVPG
NNAAISSMQEELDTKGLTDIDLHDDKWRDLNVISSLLKSFFRKLPDPLFTNEKYSDFIEA
NRTEDGVERLKTLKRLIHELPEHHYETLKFLSGHLKTVSENCEKNKMEPRNLAIVFGPTL
VRSSEDNMTHMVTHMPDQYKIVETLIQQYDWFFSEDGDEEPVTSVEQESTVQSQPVPNID
HLLTNIGRTAPSPGDVSDSATSDSAKSKQGSLGSGKDQYSRELLRSSIFASRKRKKPKDK
PQMSSSEDDLDASFSKKELQDESEPKNERNEEVKSKAGVCVRDRVEKPDDDSQRSEKSIV
NVPTEFKSDILPLKPAQSDKSGESPKKHRAHRERELVRQNSLSDPPSTSYDEGCVSDLGT
LNSTSSQASGPRIRQGRIPGPWMESAGAEVCSITSDYSTTSSMTFLMGIESTALSPAHDA
DDERSELISEGRNIDSDSESNLSVFALARDDSRSEDVSSVREEGGVTPFQNSPGLLVSQR
IVAGDTLARKRGSRQKTDSESSTDGMRSDKESRTSKMLDVVKGKNGENEPIWRIKITDRL
KCRLRASADDMFGVGSQRTRSPETRSKRKTNIRRRHTMGGQRDFAELSVITGAELSAMDR
LKPKCSSQDFSIADWIVRERHRTSNPEVSLENSDLFSAGASGSSSGMLNGDAAVAAQLKS
FSLASDAHPHKLSGAQVVRSRFYQYL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggttggagaaacaatgaggaggaggcgagttacagtgtcaacgccccactg
tgtgaggacgtgtttgagcagaaggagtctcctgcgtctatgttccagccggaggacgag
gggttctcgtggcccgggccgaagacggtgcgtttacggcgtacagcgctgggcttcggc
ttcaccctgcgccacttcatcgtgtacccgcccgaatctgccgtacattccacttacaag
gatgaggacggagatcatcgaggacgaagccggagcagactggagcccatggacaccatc
tttgtgaagcaggttaaagagggtgggcctgcacacggagccggtctctgcacaggagac
cgcatcgtgaaggtgaatggagagagcatcattgggaaaacgtactctcaggtcatcgca
gtgatccagaacagtgacacctttctggaacttagcgtgatgcccaaggatgaggacata
ctacagctggcgtactcgcaggatgcctaccttaaaagtcatcacgcttacagcggaaac
gctcgccacatcccgaagccgcctcccatatgctacccacgagtagactgtaaacccctt
gggatggccgaggcgacggaaatcacagcctcgggggggctgcagtctgatttgggatac
cgcgtggagatacctgtacccccttcgcctccacctaggatcccgaagactcaaacggcg
gtgtgcgtatgcaatgaaagtgtccggacagtggtggtgccggcggacgtccacatgagt
cacgtggttcctggagagtacagtcacacgggtcccgatccgatgctgatgagaacaagg
tcatatgttcacccgtgcaagcctgacctgtattctccaggttaccatggagattcgttc
gccgttccaccgcctcgttatcatccgtcttcttccagcgcgtcttcggcttcccatcag
aacatcgactggcggacgtatcagacttatagggaatacatcgaccacaaaggcctccac
acatacagtcggacgattcaggagcgcctggacagtttgcgtgctgccgcttcccagacc
tcttcaaactttgcgcaaaaagccacttggggcaataaaatccgacgcaggagtatgtcg
catgaccggtcgtttcaaggaccccctatgcttccgcctcgcagtgcctcccaggatcgg
atgactggggctgaaagaatgtcacgagcgcaagactggcctcctcggagcgtctcgtca
gatgggatcatccggaacgctcgtttccattccacggactacgtcgagcatggcgaaatg
gctctttggcctgtcgatctgagaggttatggcaggaccgagcaaggacctcgtcccaat
cggcaacccgttccccagagaccggtgatctatccgcattcctacggaaacaacgtccgg
ggcagatccggtccacatcagctgagctgtagaacggacatcccgcctcctgcagtttct
tctgacaggatctcgcgcgtcggcaaaaaccagcccaaagaggcgcagctgtgtaaagac
caaagactgttaagtaatcatgtggcagtttcagtggctagcctacagtctaggactcgt
gctgagactatgcaaagtccagagccagtcaaagaatcctcttcgagtcaaaggtcaacc
tcttgctcggtgcctacacctcagaggcagtcgcaacccggagccccggggcagagggtc
cacccgcgggacctcaagggattaccggtgaacgggtgcagtccagtggaaggtgtagtg
atgcgagaaaaacccactggaggtaaaagcacaccgctgcgccatccttcctacatccag
gcgcaggagcatcaggactccctgttcggctctgctaacttgaacgaatcgctcgactcc
atccccttcatcgatgagccagcaagtccgagtttggaccaggaggccagtcacatctca
gcattggctgtgatgtccacggctcagagcgcagaggccgactcacccagctcccacaca
cccagccctcagatgcgcagacagctgtctcacgaccaggaatcgctcagaagtgctatt
ctggaacaaagtggaaccaaaacggaacgctccaaatcatatgatgaaggtttagacacg
tacagggaggaagggcgacggcgttccagtaagcccagtctgaaggtgttcaggaaggtt
ctcgatggacataaattgtcagacgactccagttccaggagagactccagctcggacatc
ttcaccgattactttaaggagggctggctgcatttccgacagctcaacacggataagagc
aaacgtgtgggtggaggaatgcgggtgtggaagcagatgtacgcagtgttgcgaggccac
tccgtcttcctctataaggacaggaaggaggctcacttgcactcgcagctcgacgacgag
ccgcagcaggtgagcatcaaagcctgcctgatcgacatctcctacagcgacaccaagcgc
aaaaacgtcttccggctcaccacgtccgactgcgagtacctgttccaggccgagagtcgc
gacgacatgctgtcctggatacgagccattcaggagaacagcaatgacgagaacgccggt
gtgacgagcactgacctgatcagcaggaagatcaaagagtacatctctatgagtgctcct
acgagtaagactgaaccttcacccaaagccttgcgacagtctctgagcatcaaacacaca
ctgctgggggtcacggcggggaagagtcagagcacacactctcccaggaacgagcaagac
aggagcagcaaagatgactcgagtccaccgcgggacaaagctgcctggaagagagggatc
ccggggctgaagaaaaagcagcaggagaagaagcccacagtgggcgtgatgtttggagtg
cgactggacaactgtcctcctgcacacaacaacaggtttgtgcctctgatagtggaggtg
tgctgtaagctggtggaggagagggggttggagtacacagggatctacagagtccccggg
aacaacgcagccatctccagcatgcaggaagagctggacactaagggcctgaccgacatc
gacctccacgacgacaaatggcgggatctaaacgtcatctccagtttactcaagtcgttc
ttcaggaagctcccagaccctttgtttactaacgagaagtattctgattttatcgaagct
aatcgaacggaggatggtgtggagcgattaaaaacgctgaagagactgatccatgagctt
cctgagcatcattatgaaaccctgaagttcctgtctggccatctgaagactgtctctgag
aattgtgagaaaaacaagatggagccacgtaacctggccatcgtgtttggcccgacgcta
gtcagaagctcggaggacaacatgacccatatggtcactcacatgcctgatcagtacaag
atcgtggagacgctcattcagcagtacgactggttcttctcagaagatggagatgaggaa
cctgtaacatcagtggagcaggagagtacggttcagtctcagcctgttcccaacattgat
cacctgctgaccaacatcggccgcacggctccctcacctggagacgtctcagattcagcc
accagtgactctgccaaatcaaagcagggctcccttggctcgggtaaagaccagtacagc
agagagctgctgcgctcgtccatcttcgccagccgcaagcgcaaaaaacccaaagacaaa
cctcagatgagcagctcagaggacgacctggacgccagcttctccaagaaagagcttcag
gatgagagcgagccgaagaacgagcgcaacgaggaggtcaagagtaaggcaggagtgtgt
gtgcgcgatcgtgtagaaaagcctgacgatgacagccagagatcggaaaagagcatcgtc
aatgtcccgaccgaattcaaatccgacatccttcctctgaaaccggcgcagtccgataaa
tccggcgagtctccgaaaaaacacagagcgcacagagaaagagaattggtgcggcaaaat
tcactctcggatcctccctcgacctcatacgatgagggctgcgtttcggatttgggaacg
ctgaacagcaccagctctcaggcgtccggacccaggatccggcagggcagaattccaggt
ccctggatggagagcgcaggggcggaggtgtgctccatcacgtcagattactccaccacg
tcgtccatgacattcctgatgggtatagagtctaccgcgctgagtccggctcacgacgcc
gatgacgagaggagtgagctcatcagcgaaggcaggaacatcgattcggacagcgagagc
aacttatccgtgttcgcgctcgccagagacgacagcaggtctgaagacgtttcatctgtg
cgagaagaaggcggagtcacgccttttcagaattccccaggcctcctggtgtcgcagcgc
atcgtcgcaggcgacacgttagcacggaagagaggaagccggcaaaaaacggacagcgag
tcatcgacggatggcatgcgcagcgataaagagtcgaggacttccaaaatgctggatgtc
gtcaaggggaaaaatggtgaaaacgaacccatctggcgaatcaaaatcaccgaccgcctc
aagtgtcgactccgtgcctccgccgacgacatgttcggcgtcggatcgcagcgcaccaga
tctccagaaacgcgcagcaaacgcaagaccaacatacgtcgccgccacaccatgggcgga
cagagagacttcgcggagctgtcagtcatcaccggggccgagctctccgccatggatcgc
ttaaaacccaaatgcagctcgcaggacttttctatcgccgactggattgtcagggagcgc
caccgcaccagcaacccggaagtcagcctggaaaactcggacctgttctccgctggggcc
tcggggtccagttcgggaatgttaaatggagacgcggcggtggcggctcagctcaaaagc
ttcagcttggcctctgacgctcatccacacaaactgtctggggcgcaggtggtgcgctcg
cgtttttatcaatacctgtga
DBGET
integrated database retrieval system
