Ictalurus punctatus (channel catfish): 108267756
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Entry
108267756 CDS
T04658
Name
(RefSeq) DDB1- and CUL4-associated factor 8
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108267756
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108267756
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
108267756
NCBI-ProteinID:
XP_017327643
Ensembl:
ENSIPUG00000011164
UniProt:
W5UHY2
LinkDB
All DBs
Position
7:10880034..10890044
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AA seq
614 aa
AA seq
DB search
MADAQEQSSVPNGGADDPEPEKGRGSKSSSTLPTEDLIRPDSELSPQQPQPAALEEEEEE
EGDTDSMDGSLMYSFVEEGKEQDSEGSGRRERAKKDESRRAGRKRNRPTSRHSSSSDDDD
DDDDDEEEDDDDDDDDAEDEEENEKEEEEDMEAWFGAEVKEMGGPKWRAVPSLRAREIGK
NSAQFARSVCGSRGLVQRLELQARLERHSGCVNTLHFNPSGTRLASGSDDLRVVIWDWAR
RRAELEFDSGHKSNVFQAKFLPHSGDSTLAMCARDGQVRIAELSATQRCKNTKRVAQHKG
AAHKLALEPDSPCCFLSTGEDAVVYGIDLRIDRPANKLVVVKESDKKVGLYTIYVNPANT
HHFAVGGRDQYLRIYDQRKINENDNNGVLKKFCPSHLVSSESKTNITCLVYSHDGSELLA
SYNDEDIYLFDSSHSDGADYRRRYKGHRNNATVKGVNFYGPCSEFVVSGSDCGHIYLWDK
HSARVVQFMEGDRGGVVNCLEPHPHLPGLATSGLDHDVKLWAPTAENPTSLKGLKEVMKK
NKRERDEDSVRHGEQYDTQLLWFLMRHMRNRRPFRSQSRHGEGGDGDTDTESWSSPESSD
DEDGGPDHVQCMSS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgctcaagagcagtccagtgttccgaacggtggcgctgatgatccagaaccg
gaaaaaggaagaggcagcaaaagctcctcgactttacctacagaggatctgatacgacct
gattcagaattgagcccacagcagccgcagccagctgcattagaggaagaggaggaggag
gaaggggacacagacagcatggatggcagccttatgtactcttttgtggaagagggaaag
gagcaagacagtgagggcagcgggcgaagagagcgagcgaagaaagacgagagcaggaga
gcaggccggaagcggaaccgacccacgtcacgccactcctccagctctgacgatgatgat
gacgacgacgatgatgaagaagaagatgatgatgatgatgatgatgatgcagaagatgaa
gaggagaatgaaaaggaagaggaggaagacatggaggcatggtttggggcagaggtaaag
gaaatgggcgggcctaagtggcgcgcagtgccgtctctgcgggctcgggagattgggaag
aactctgcacagtttgcgcggagtgtgtgcggctctcgaggcctggtccagcgcctggag
ctgcaggctcggctggagcggcacagtgggtgcgtcaacacgctccactttaacccctcc
gggacacgcctcgcttcgggcagtgatgacctgcgtgtggtcatctgggattgggcgaga
cgccgtgccgagctcgagttcgacagtggacacaagagcaacgtctttcaggcgaagttt
ctccctcatagcggagactccacgctggccatgtgtgctcgggatgggcaggtcagaata
gccgagctgtctgccacgcagcgctgcaaaaacacaaaacgagtggctcagcacaaaggc
gccgcacacaagctggccctggagccggattcgccctgctgtttcctctccacaggagaa
gatgccgttgtgtatggcattgacctgcgaatcgatcgacctgccaacaaactggtggta
gtgaaggaaagcgacaagaaggtgggtttgtacaccatctacgtgaacccggccaacacg
catcactttgccgttggaggaagagatcagtacctaaggatctacgatcagaggaaaatc
aacgaaaatgacaacaacggtgttctgaagaagttctgtccatctcacctggtgtccagt
gaatccaaaacaaacatcacctgcttagtgtacagccatgacggctcagagctgcttgcg
agttataatgacgaggacatttatctgtttgactcgagccatagcgatggtgccgattat
cgccggagatacaaaggacaccgcaacaatgctacagtgaagggcgtgaacttctacggg
ccttgcagcgagtttgtagtgagtggaagcgactgtggacacatttacctgtgggacaaa
cactcggcccgtgtggtgcagttcatggagggtgaccgaggcggagtggtgaattgttta
gagcctcaccctcacctgcctggtctagccaccagcggcttggatcacgacgttaaactc
tgggctccgactgcagagaaccccaccagcctgaaaggcctcaaagaggtgatgaagaag
aataagcgcgagcgtgatgaggacagcgttcggcacggcgaacagtacgacacgcagctc
ctctggttcctgatgagacacatgaggaaccgcagaccttttcgatctcagagccgacac
ggagaaggcggagatggagacacagacacggagtcctggagctctccagaatcttccgat
gatgaggacggaggccctgaccacgtccagtgcatgtcctcctga
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