Ictalurus punctatus (channel catfish): 108267777
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Entry
108267777 CDS
T04658
Name
(RefSeq) aspartate--tRNA ligase, mitochondrial isoform X1
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108267777
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108267777
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108267777
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108267777
Enzymes [BR:
ipu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
108267777
Amino acid related enzymes [BR:
ipu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108267777
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108267777
Prokaryotic type
Other AARSs
108267777
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108267777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-GeneID:
108267777
NCBI-ProteinID:
XP_017327681
Ensembl:
ENSIPUG00000017874
UniProt:
A0A2D0RC20
LinkDB
All DBs
Position
7:2917812..2940321
Genome browser
AA seq
661 aa
AA seq
DB search
MANKRVPLWLLLRAARCVCRYPRHTLIPVTVRHVYASQSIFPLVPASSRLFFSTNTSGQG
SLCIRTHTCGELGSGHVGQEVTLCGWVQYLRQNLFVILRDFSGLVQVLIPQDESERELKD
AFSGLSVESVIKVKGRVRLRPDGQRNMNMSTGEIEVRAESLEVLNTCRKLPFEIKDFVKK
SEALRMQYRYLDLRSSQMQYNLRLRSRLVMKMREYLCNVHGFVDVETPTLFKRTPGGAKE
FVVPSGEPGMFYSLPQSPQQFKQLLMVAGLDRYFQLARCYRDEGSKPDRQPEFTQLDVEM
SFVDAAGIMALIEGLLQYSWPEDKGTISTPFPCSTYEEAMKDYGVDKPDTRFGMKLVDVS
EMFQRTQIEFIRDAIVRPGGCVQAICVPDGAKHLKGKDMEFLKQTAKTQFNQEVDCMLVR
AEGSIKSPLGRLIADTTRLQLLLKTSAKAGDLLLIAAGAQERVRPLLGKLRLQCAELLEA
RGVPVRDPSVFHFLWVVDFPLFLPKEDEPERLESAHHPFTAPLPEDAHLLYSQPHKVRGQ
HYDLVLNGCEIGGGSIRVHNAAQQLYVLENILKEDPSVLSHLLEALDSGAPPHGGIALGL
DRLVSIIVGASSIRDVIAFPKSFRGHDLMSHAPDLVPEEELRSYHISVLWPSVKNGQDNK
P
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataaacgcgtcccgttgtggttgttgctaagggcggctcggtgtgtttgtcgc
tatccacggcacactctgatacctgtaaccgtacgccacgtttacgcttcacaatccatc
ttcccactggttccggcttcttcccgactcttcttcagcactaacacttcaggtcagggc
agtctgtgcatccgaactcacacctgtggagaactcggctccggtcacgtgggacaggaa
gtgacgttgtgtggctgggttcagtatctgagacagaacctgtttgtgatcttgagggac
ttcagtggtttggttcaagttcttatcccacaggatgagtctgagcgggaactgaaggac
gcgttcagcggcttgtcggtcgagtcagtcatcaaggtgaaaggaagggtcaggcttcgt
ccggacggccagaggaacatgaacatgtccactggagaaattgaagtgcgtgctgagagc
ctggaagtgctgaacacctgccgcaaactgcctttcgagattaaagactttgtcaagaaa
tccgaagccctccggatgcagtatcgctatctcgatcttcgctcgtcgcagatgcagtac
aatctgagactgcgatcacgactcgtgatgaaaatgagagagtacctctgcaacgtccat
ggatttgtggacgtcgagacgccaacgctgtttaaaaggacccctgggggtgccaaagag
tttgtggtgccatctggagaacccggaatgttctactctctcccacagagtccacagcag
ttcaagcagctactgatggtggcaggtctggataggtactttcagctggcacggtgctac
agagacgaaggctccaaacctgaccggcagcctgaattcacacagctggacgtcgagatg
tcgtttgtggatgcggctggaatcatggctctgattgagggcttgctgcagtactcctgg
ccagaagacaaagggaccatcagcaccccgttcccctgctcgacatacgaggaagccatg
aaagattacggcgtggataaacccgacactagattcggaatgaagcttgtggatgtcagc
gagatgttccagcgcacacagatcgagttcatcagagacgccatcgtccgaccgggcggc
tgtgtccaggccatctgcgttccagacggagctaaacacttgaagggcaaggacatggag
ttcttgaaacaaacagccaagactcagttcaaccaggaggtggactgcatgctggttagg
gcagagggatccatcaaatctcctctcggtcgcttgatagcggacacgacaaggctgcag
ctgctgctgaagacgagcgccaaagccggagacctgctcctcatcgccgccggagcccag
gagcgggtgcgcccacttctggggaaactgagactgcagtgtgctgagctgttggaggct
cgcggcgtgcccgtacgtgacccttcagtctttcacttcctgtgggtagtggactttccc
ctcttcttacctaaagaggatgaaccggagcgactggaatctgcacaccaccccttcacc
gcacccctgcccgaggatgcccacctgctctactcccagccccataaggtgcgcggccaa
cactacgacttggtgctgaatggctgcgagatcggtggcggctccatccgcgttcacaac
gccgctcaacagctctacgtcctggagaacatcctcaaagaggacccgtctgtcctctct
caccttttggaagcgttggactccggggcccctccacacggcgggattgcattaggtttg
gaccggctggtgtccatcatcgtgggggcttccagcatcagggatgtcatcgccttccct
aagtccttcagaggtcatgacctcatgagccacgcccccgacttggttccagaagaggag
ctgaggtcataccacatctctgtgctctggcctagtgttaaaaacggacaagacaacaaa
ccatga
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