Ictalurus punctatus (channel catfish): 108267809
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Entry
108267809 CDS
T04658
Symbol
rbm12bb
Name
(RefSeq) RNA binding motif protein 12Bb
KO
K24526
RNA-binding protein 12
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108267809 (rbm12bb)
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108267809 (rbm12bb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
108267809
NCBI-ProteinID:
XP_017327729
Ensembl:
ENSIPUG00000001167
UniProt:
A0A2D0RB00
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All DBs
Position
1:complement(13359754..13364933)
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AA seq
632 aa
AA seq
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MAVVIRLQGLRITAGSEDIRNFFTGLRIPDGGVHIIGGELEEAFIIFASDEDARRAMTRS
GGCIKGAPVNLLLSSRSEMQKVLEESTRKSEPNNRRNYKEVVKRPAVEGRPMSLNEDMKV
DMRRGDNQNMGNRPLLASPNDSRIQKKDGDGVYLYLSGMPFSATKEDVRVFFDGVQIDDL
IFMRNNYGMFNGCGLVKFQTREDAIEGLKRDRKYIGPRYIRVMPASEHQWVKSGGSVKPE
GASQRKHTLERTRSRSPIRHRSHSPSSEEFGVLYENLPYSVEKRDIKALLQPVSLTDDQI
SIFVDNNSDMSKSAIVVFKNLKDYCSGLAHHKETFLHRVVYVSPVSKEKIATLLESTDKL
REDHRRSSRSSENSQKSTHDSERRCIYVRNLPFDVRKVEIMDFFHEFQLSEDRLILLYDE
RGTGLGEALVIFQTEKEAVMAQSLNGRRFLGSVVMLKCITWAQMKEFGIDNSSIPERNLQ
RNSPKYGGEPNFVNDQMYQDNCDVIPDATMSWKKDYVPGNSGPLDHFESPDAYGQGPYGP
DSHQYGPPDQQLNRPTYVRLLNLPSKIRVDEIYDFCYGYKVIPGSVSLQYNRSGTPTGTA
TVVFESHNEAVTAVQELNGRPIGTRKINIVFV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtcatccgcttacagggacttagaatcacagctggttctgaggacattcgc
aatttcttcactggccttagaatacccgatggtggggttcatataattggcggagaactt
gaggaagcgttcataatttttgcatctgatgaagatgcaagacgagcgatgactcgctca
gggggatgcattaaaggcgccccagtcaacttgcttttgagtagcaggtcagagatgcag
aaggttcttgaggaaagcacaaggaaatcagaaccaaataacaggaggaattacaaggag
gttgtcaaaagaccagcagtcgaagggagacccatgtcactgaatgaggacatgaaagta
gatatgcgaagaggagataatcaaaacatgggaaacagacctcttctagcttctcctaat
gactctcgaattcagaagaaagatggagatggcgtctatttgtacttgtctggaatgccg
ttttcagcaacgaaggaggatgtccgtgtcttttttgacggtgtacaaattgatgaccta
atttttatgcgaaacaattatggaatgtttaatggatgtggtttggtcaagtttcaaaca
agagaggatgccattgaaggtctgaagagggatcgaaaatacattggaccacgttacatc
agagtaatgccggcctcagaacatcagtgggtcaaatcagggggttcggttaaaccagaa
ggtgcaagtcagagaaaacataccttagagcgcacaagatctcgctctcccattcgtcat
cggtcacattctccttccagtgaagagtttggtgtgttgtatgaaaacctcccatattca
gttgaaaagcgagatataaaagccttactccagcctgtgtctttgacagatgaccagatc
agtatttttgtggataataatagcgatatgagcaagtcagctattgtggtgttcaagaat
ctaaaggactattgttctggcctggctcaccacaaggaaacatttctgcaccgtgttgtt
tatgtgtctcctgtctccaaagaaaagattgccactctactagaatctactgataaacta
agagaagaccataggagatccagcagatcatctgaaaattcacaaaagagtactcatgac
tctgagagacggtgcatatatgttcgcaacctgccttttgatgtccgtaaagtagagatc
atggacttcttccatgaattccagctttcagaggacaggcttatccttctctatgatgaa
cgaggaactgggcttggtgaggctttggtgatttttcagacagaaaaggaggcagtgatg
gcacagtctctgaatgggcgaagatttcttggctcggtggtcatgctgaagtgcatcacc
tgggctcagatgaaggaatttggtattgacaacagcagcattcctgagagaaaccttcag
aggaactcaccaaaatacggcggtgagccaaatttcgttaatgaccaaatgtatcaggac
aattgtgatgtaattccagatgctactatgtcctggaaaaaggactatgtccctggaaat
agtggtccattggaccattttgaaagccctgatgcttatggacaggggccatatggtcct
gactctcatcaatatggaccacctgaccaacaacttaatcggccaacatacgtcaggttg
ctcaatctaccctctaagataagggttgatgaaatctatgacttctgctatgggtacaaa
gttattcctgggtctgtctcgttgcagtataataggagtggaacacctacaggcactgca
actgttgtgtttgaaagccacaatgaggcagtcactgctgtccaagaattaaatggaaga
cccattggtacgaggaaaattaatattgtgtttgtgtag
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