Ictalurus punctatus (channel catfish): 108267831
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Entry
108267831 CDS
T04658
Symbol
dync1i1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108267831 (dync1i1)
09142 Cell motility
04814 Motor proteins
108267831 (dync1i1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108267831 (dync1i1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108267831 (dync1i1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108267831 (dync1i1)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
108267831 (dync1i1)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
108267831 (dync1i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML
WD40_Prp19
WDR55
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Dynein_IC2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
108267831
NCBI-ProteinID:
XP_017327772
Ensembl:
ENSIPUG00000002298
UniProt:
A0A2D0RB49
LinkDB
All DBs
Position
1:complement(6638036..6656950)
Genome browser
AA seq
631 aa
AA seq
DB search
MSDTRNIKAKLERTKQLVAEMHEEKRRKAEERKKKESEVQQMAECASDDSDLDRKKSEIS
QEPPLVQPLHLLTWDTCYFHYLVPTPMSPSSQSVSASSENGSQESVEGGTMARTLQWDMD
PSALQLLADSEHRYVMKRLETSEIVQIDYIPKKLVTYCKETQTPVASNVSEEEEKEDEEL
PVVQPKPQSEEHLVTDNQETMQEHPKELTEEEKQQIVQSEDFLTFFDRSIRLVERTLAED
LDIFFDYSGRDMEDREGDTQAGLNLSFNQQFYDEQWSKHRVVTCLDWSPQYSELLMASYN
ANEHAPQEPDGVVLVWNMKFKKTIPEYIFHCQSSVMSVGFAQFHPNLIVGGTYSGQIALW
DNRSPRRTPVQRTPLSAAAHTHPVSSVNVVGTQNANSLITVSTDGKMCSWSLDMLSQPQD
SMELYYNKSKVVAVTGMAFPVGDVNNFVVGSEEGTVYTASRHGSKAGISEMFEGHQGPVT
GISCHNAVGPIDFSNLFTTSSFDWTAKLWSTKHNKPLYSFEDSVDYVYDVMWSPVHPAVF
ATVDGIGRLDIWNLNKDKEVPTASVTVEGSFALNRVRWASGGREVAAGDSEGRVWIYDVG
ERLAVPHSEDWSRLAQVLMEMRANADGEVTG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacacacgcaacattaaagccaaactggagcgcacaaaacagcttgtcgctgag
atgcatgaagaaaaaagaagaaaagcagaagaaagaaaaaagaaagagtctgaggtacag
caaatggcagagtgtgcatcagacgactcagacttggatagaaagaaaagcgaaatctct
caagaaccgcctttagtgcagccactccatcttttaacatgggatacctgttattttcat
tatttagtcccaacccctatgtctccctcttcgcaatcagtgagcgcttccagtgagaac
gggagccaggagtcagtggagggaggaaccatggctaggacgctgcagtgggacatggac
ccctcagctcttcagctcctagcagactcagagcacaggtacgtaatgaagagacttgaa
acatcagagattgtacagattgattacatacccaagaaactggtgacgtactgtaaagag
acccagactccagtagcatcaaatgtgtctgaagaagaagagaaggaggatgaagaactc
cctgtggtccaacccaaacctcaatctgaagaacatctggtgacggacaatcaagagacc
atgcaagaacatcctaaggagctcacagaggaagagaagcagcagattgtccaatcagaa
gatttcctgaccttctttgaccgtagcattcggctggtggagcgaactctagctgaggac
ctggatattttctttgactacagcgggcgtgacatggaagacagagagggagacacacaa
gctggtttaaatctgtccttcaaccaacaattctatgacgaacagtggtccaaacatcga
gtcgtcacctgtctggattggtcaccgcagtactcagaattgctgatggcttcatacaat
gccaacgaacacgcaccacaggaacctgatggagttgtgctggtgtggaacatgaagttt
aagaagacaatcccagaatacatatttcactgtcagtcctctgtgatgtcagtgggtttc
gcacagtttcatccaaacctcatagttgggggcacttactctggccagatagcattgtgg
gacaatcggagccccaggagaactccagtacaaaggacacctttatctgctgctgctcat
actcatcctgtgtccagcgtaaacgtggtgggaacccaaaacgccaacagcctgatcacc
gtgtccacagatggcaagatgtgctcctggagtttagatatgctctctcagccacaggat
agtatggaactgtactataacaagtccaaggttgtagctgtgactggaatggcttttcct
gttggtgatgtgaataactttgtggtgggaagtgaagaagggacagtgtacacggcctca
cggcacggcagtaaagctggtattagtgagatgtttgagggccaccaaggaccagtgact
ggcatcagctgccataatgctgtgggccccattgatttctccaacctcttcaccacctca
tcctttgactggactgccaaactgtggtcaactaaacataacaaaccgctctactctttt
gaggacagtgttgactacgtctatgacgtcatgtggtctcctgtgcaccctgctgtcttt
gctacagtggatggaataggtcgccttgacatttggaacctgaataaggacaaagaggtt
cctacagcaagtgtgacagtggagggctcttttgctctgaaccgggtcagatgggcatca
ggaggtcgcgaagtagctgcaggtgattctgagggtcgagtctggatctatgacgttgga
gagcgattggcagtgccacattcagaggactggagccgacttgcacaagttctcatggag
atgcgtgcgaatgctgatggagaagtgactggctga
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