Ictalurus punctatus (channel catfish): 108267926
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Entry
108267926 CDS
T04658
Name
(RefSeq) low-density lipoprotein receptor-related protein 10
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108267926
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108267926
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
108267926
NCBI-ProteinID:
XP_017327943
Ensembl:
ENSIPUG00000006635
UniProt:
A0A2D0RBM9
LinkDB
All DBs
Position
7:24316244..24325841
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AA seq
763 aa
AA seq
DB search
MDALYSLWIFSLLFLTVHCSLELASNSAHCFKPPKILQSRQGEVRGSSRYGPPGPVNCSW
VITSPVGERVILSFSEFFIKCGWSWLSLTTVTGQPVSLCGYELPKPMEFSEGNITVTHHF
VPHFYSVSGFHLSYIKDSGPCYPGEFECYSERCLPMSWRCNGQVECLGEGDELGSDEEDC
DPIEPQPHPDNEPSPFPTEIPASSVVNPNMEIGNLPHGVPDLSSPAQGGPCGGNLHAFYG
SFVPPVLTGASMECVWSVDPQDSRPLKLELQQLVLGPKDSLIITDQPAGGGNVIIAVTYT
STDKTVEVESPTGLLSLTYRAQEPFEGRGFNATYRIADYCLPWEGLCKGSEGGCYTQKQR
CDGHWDCAETGLDEDGCGGCPAGYFPCGTLALQRVGHLGRPACYSIKERCNYQLNCADGS
DERECKVCQPGTFHCDSDRCVFESWRCDGQVDCKDGTDELNCTVTLPRKVITAATVGSLV
CGLLLVIAMGCTCKLYSLRTREYSLFAPISRQEAEFIQQQAPPSYGQLIAQGIIPPVEDF
PTENPNEPTSLSLRGLLQLIRQDNISSPRRRRRPRFVRRAIRRLRRWGLISRPSSRSSQT
TSSTTQQTEAAPTGQESRQSGPPGSAVPRETSDQPLPQKLGLSQQTEQQQQQADAPPPLT
PPPPPPPPPLPTTLATTPPSLQPADPPETRQTPPVAVAPSSPSLASLFHSLGLSISRFRH
LSSPTALPLSSSPSFSSSSSEDEVLLIPLSDDTTSEDDVPMLT
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctctacagcctgtggatttttagccttttatttttaacagtccactgcagt
ctggagctggcctccaattcagcacattgtttcaaaccaccaaaaatactacagtcaaga
caaggagaagtccgtggttccagccgctatggccctcccggccctgtgaactgcagctgg
gtaatcacttccccagtgggagagcgtgtgattctcagtttctctgagtttttcatcaaa
tgtggctggagctggctaagcctaacaaccgttacaggccagcccgtgtcgctctgtgga
tacgagctgcctaagccaatggagttctctgagggaaacattacagtgacacaccacttt
gttccgcacttctactcagtttcagggttccacctttcatacattaaagacagtggtccg
tgttatccgggcgagttcgagtgttacagtgagcgctgtcttcccatgtcctggcgctgc
aatggtcaggtggagtgcctcggggaaggtgatgagctcggctcggacgaggaggactgt
gaccctatcgaacctcaacctcatccggacaatgagccctcaccattcccaactgaaatc
ccagcaagctcagttgttaacccgaacatggagataggaaatctgccacatggggtgcct
gatctctcctctccagcccagggtgggccctgtgggggtaatctgcatgccttttatggc
tcttttgtgcctcctgtactgacgggggcatcaatggagtgtgtgtggtcagtggaccca
caggactcccggcctctcaagctggagctgcagcagctggtacttggccctaaagacagc
cttatcatcactgaccagcctgccgggggtggcaatgtcattatagctgtcacatataca
tctactgacaaaacagtggaggtggagtcccctactggtctgctgtcactaacctatcgt
gcacaggagccctttgaggggcggggcttcaatgccacataccgcatcgctgattactgc
ctgccctgggaaggtctttgtaagggctcagagggaggctgctacacgcagaagcagcgc
tgtgatggtcactgggactgcgcagagactggtctggatgaggatggctgtggcggatgc
ccagccggctacttcccctgtgggacactggcactacagagggtggggcacctgggccgg
cctgcctgttattccatcaaagagaggtgcaactaccagctgaactgcgctgatgggagt
gacgagagagagtgcaaagtgtgtcagcctggcacattccactgcgacagtgacaggtgt
gtgtttgagagctggcgctgtgacggacaggtcgattgtaaggatggcaccgatgaacta
aactgcactgtgactctgcctcgaaaagtcatcaccgcggcgactgtgggcagcctggtg
tgtggtctgctgctggttattgcaatgggctgcacctgcaaactgtactcactacgcact
cgagaatacagcttgtttgccccaatcagccgtcaagaggcagagtttatccagcagcaa
gctccgccctcctatggtcagctgattgctcagggaattattcctcctgtagaggatttc
cctactgagaacccaaatgagcccacatcactttctctgagaggactgcttcagctcatc
agacaggacaacatctcctccccacggcgaagacgcagaccacggtttgtccgccgagcg
atacgccgcttgcgtaggtggggcctaatttctagaccatcctctagatcttcccagaca
acgagctccaccactcagcagacagaagctgctcctacaggtcaggagtccagacagtct
ggccctccaggctctgcggtgcccagagaaacctctgatcagcctttgccacaaaagttg
gggttgtcccaacaaacagagcaacaacaacaacaagcggatgcaccacctcctcttacc
ccgccccctcctcctcctcctccacctcttcctacgacacttgccacgactccaccttcc
ctccagccagctgatcctccagaaacacgtcagaccccacctgtcgctgttgcccccagc
agcccctccttggcctctctcttccattctctggggctaagtatctctcgtttcagacat
ttgtcttcccctaccgcacttcctctctcatcttccccgtctttttcctcctcttcctca
gaagacgaagtgctactgatccctctttccgatgacacgacctctgaggatgatgtgccc
atgctgacctga
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