Ictalurus punctatus (channel catfish): 108268001
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Entry
108268001 CDS
T04658
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108268001
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108268001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_NWD2_C
EIF3I
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
AAA_16
NPHP3_N
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RSE1_2nd
AAA_22
AAA
AAA_28
PQQ_2
Beta-prop_WDR19_1st
NPHP3
TniB
NACHT
ATPase_2
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
108268001
NCBI-ProteinID:
XP_017328117
Ensembl:
ENSIPUG00000001909
UniProt:
A0A2D0RC45
LinkDB
All DBs
Position
7:complement(20395427..20447859)
Genome browser
AA seq
1747 aa
AA seq
DB search
MKRMNTRRKSSPMWPSGVGSRLPCPRESALRRAAISGNVLALPPNHVPTGRSVRVFICAN
PDDTEAERNALKEHVYPKLRDFCRENYGIEFQVVDLYWGVDPEEWDSPELQRLRMKLLEE
CLKTSAGPCFVGLVGEKYGSIRVPGEVESAEFEMILDAAVEAGLDTRILEEWYCRDENSV
PPAYYLKPKAEMLKNYQNSMESSSVAKAKNAKAWRAVSEEIKKIFRTAVLQLQEKGTMKS
PQAKKFLCSALEDELDFALGKQTPAFLKKCVCYIRKISNFERFAKIPDMARYMDTVMSGD
RIMRNQEAYERLLKVRDEFIPTIVAASNLRVYSSVTHCDMKLGYSQEVESHYVEGLCKQF
YEDMVDIIQATVQQNFDTETDLLYDEIIQHLSLCKTFSSFYVYKSEVLDMVQEYLYPSKG
GRILPLVIYGGPCTGKTLLLAEVAKQAYSCLQKEMGTETDPVIIVRFIGSSDLSTDLRNL
LQSICEQIAINYRCLIHYLPNKIEEMRELLINLLRESSFHRPLVIILDSLEQLSEADEAR
KLWWLPIHLPCTVRIVVSTLPNKHGILQKLRCLIHDEDCYVELTQRDRKACSQTLKQQLL
SVKRKVTSGQQIYVNEALAKCTLPMFVNLIYREVVHWRSHKDVDEKSLCSTVHESIEHLF
ISIENKLGSHFVFRALGYITMAHVGLTEVELEDILSLDNSVLGDIMVSSNLKSPLRISYD
LIAQLREELEGYLVERQVRNVTLMVWANRHLHLIAQKLYLSNEEDVHQMHSLLAEYFLGV
WAGGRKKIFHCDNNHFASLNISQHRNPHNQQSLHGHDKASADKHSYDRQTPEQPWVFQCN
LLEPDIFFVNHRKMTELLFHLTRSGRTDDLMYGVIMNFSWLYTMIKIGQFDKALSDIDLA
YSYSQEKELKFLATTLRSIKVKVIKNPASLSAELQQRLLPVVTSLPKLRHLLLECDKDGP
KYCSIVPLHSSMDVTYSPERLPLCSSYMQIVEILPTLAPNIVIAALEDGSVSTWDVESKQ
LLRQIDTARSVVLGVRLTTDEKYLVVATTKNTLLIYDNHKSCLLSEVEVKGSKHCGITGG
VAFINGFTLSSPHALAWLEASKDVNVIDLQYGWPLYQFHCWYEVTCVECSPDGMYAFCGQ
YLNTTTIFHLGNGDKLATVTSEFSGGFVKSILVLDTIHQMVMIDNEGSLSVWNTKDITNP
RLMEDYDCRGDDSEVVGIELSEDQKSVLICKARSIEVLDTKLWKMVEKFKAKRSERFVAA
VLSKNGQSIVASMENTSSIFVWRRDSGQCMASLIEISGAIVKLIKSTHHNLLLSVASSGV
LSVWDIDIITAMSNIDKTGKQIQSVQLSGREDFVYTMDGSEAIHKWNFNTGFIEMVFKHE
GLVENCVLTTSGDLMVTSDDKCSQYIWQTATGENIFRINGQKISQLLITHNDQFVVSLCE
QNASRVWRLATGHKVCNILVTLQHALITTANTFLVGTTKNKLLAVSLWSGSVSKKFVCDD
GITIINFKLIPDSPDFVVFITSTETVFMWSVADESVCRRVQLPSNFLKNLEDFQISPNGK
LGIVSKGDDNINVLDLHSGKLRLIHAAGIIWRQKLSRDGRYLVYICFQNCDEDDDAGVVS
SLIVMRLADGKSIGTCSLYKTPTYLCLSQRALNIIIGFEDGSIGTYTVVDRVDAALKIKI
ATSNSRQIVNNASQKIRPKCSTNAFKTIADCMWRESTEVFSRDSPINVSDSGEPETTTPT
KKTELLQ
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgaacacccgcaggaagtcttccccgatgtggccgtccggagtgggcagc
agactgccgtgtcctcgcgagtcggcgttgcgcagagcggccatcagcggaaacgtgctc
gcgctgccgccgaatcacgtgcccacgggccggagcgtgcgcgtcttcatctgcgccaac
ccagacgatacggaggcagagaggaatgccctgaaagaacacgtctaccccaaactgagg
gacttctgtagagaaaactatggcattgagttccaggtggtggacctgtactggggtgtg
gaccctgaagagtgggacagtccagaactacagagactgcggatgaagcttctagaagaa
tgcctgaagacatctgcaggtccatgctttgttggtttggtgggggagaagtatggcagc
attcgtgttccaggggaggtggaatcggctgagtttgaaatgattctagatgcagcagtg
gaagcaggtctggatacacgaatcctggaggagtggtactgccgggatgaaaactcagta
ccaccggcatactacctcaaacccaaagctgagatgctgaaaaactatcagaactcgatg
gagtcgagcagtgttgcaaaggccaagaatgcaaaggcttggagagctgtctctgaagag
atcaagaaaatctttagaactgcagtcttacaactacaagagaaaggaaccatgaaaagt
ccacaggccaaaaaatttctatgttcggcactggaggatgaattggactttgctttagga
aaacagaccccagccttcctgaagaagtgtgtgtgttacatccgcaaaatctccaacttc
gagcgctttgctaagatcccagacatggcccgctacatggacactgttatgagtggagat
cgcatcatgaggaaccaagaggcctatgagcggcttctgaaagtcagagatgagttcatc
cccacaatagttgcagcatccaacctccgtgtctattcctcggtcactcattgcgacatg
aagctgggctactctcaagaggtagagagtcattatgtggagggtctgtgcaagcagttc
tatgaggacatggtggacattattcaagctactgtccagcaaaactttgacacagaaaca
gatctattgtatgacgagatcatacaacatctttcgctgtgcaagacattttcctcattt
tatgtatataaaagtgaggtcctggatatggtgcaggaatacctgtacccatccaaagga
gggagaatattgcccctagtcatttatggagggccatgtacaggaaagacgctgttgctt
gctgaggtggcaaaacaggcatactcatgtcttcagaaagaaatggggacagaaacagat
cctgtcatcattgttcgcttcattggttcctctgacctctctacagacctccgcaacctc
ctccaaagtatttgtgagcaaattgccataaactatcgctgcttaatccactacctacca
aacaagattgaagagatgagagaattgttgattaaccttctgagggagtcatccttccat
cgaccactagtgatcatactagattccttggaacagctgtcagaagcagatgaggcacgt
aagctgtggtggttgcctatccaccttccttgtacagttcgcattgtggtatcgaccttg
cctaacaaacatgggatactacagaaattacgttgcctgattcatgatgaggactgctat
gtagaattgacacaaagagaccgtaaagcatgtagccagacactcaaacagcaacttctg
agtgtcaaacgaaaagtaacctcaggccaacagatatatgtaaatgaagcactggctaaa
tgtacactgcccatgtttgtcaaccttatctatcgtgaggtggtacactggcgctcacat
aaagatgtcgatgaaaagtccctttgctcaacagtacatgagagcatagaacatcttttc
atttccattgaaaataaactggggtcgcactttgtctttcgtgcattgggatacattaca
atggcacatgtagggttgacagaggtcgaactggaggatatattatctttggacaatagt
gtacttggagacatcatggttagctcaaatctaaagagtccactgcgaatctcctatgat
ctcattgctcaactaagagaagagctggagggttacttggtggagcgtcaggttcggaat
gtaaccctgatggtttgggcgaacaggcatctgcatctcattgcacaaaagctgtatctc
agtaatgaagaagatgtgcatcaaatgcacagccttttagctgagtattttcttggggta
tgggcaggtggtagaaagaagattttccactgtgacaacaatcactttgcctcattaaac
atctctcagcatcggaaccctcacaaccaacaaagccttcatggccatgataaagcctct
gctgacaagcattcttatgaccggcagaccccagaacaaccctgggtgttccaatgcaac
ttactcgagccagacatcttctttgtcaatcaccgaaaaatgacagaactgttatttcat
ttgacaaggagtgggcggacagatgacctcatgtatggcgttatcatgaacttcagttgg
ctatatacgatgataaagattggacaatttgacaaggccttgtcagacattgacttggcc
tacagctactcacaggaaaaggagctcaagttccttgctaccacactacgaagtataaag
gtcaaagtaatcaagaaccctgcctcgctgtctgcggagcttcagcaaagacttcttcct
gtggtcacatcccttcccaaactccgacatctcttactagagtgtgacaaggatggaccc
aaatactgctccatagtgccactccactcttccatggatgttacatacagtccagagaga
ctaccactgtgctctagttacatgcagattgttgagattttacctaccttggctcccaac
attgtaattgcagctcttgaagatggctcagtcagtacatgggatgtagagagcaaacag
ttgctgagacagattgacacagcaaggtcagttgtgcttggtgttaggctcaccactgat
gagaagtatcttgtagttgccactacaaaaaacacgctactaatttatgacaaccataaa
tcctgtttgttgtcagaggtggaagttaaaggctcaaagcactgtggcatcacaggtggg
gtggcattcatcaatggatttaccttatccagcccccatgctttagcttggctggaggcc
agtaaagatgtcaatgtgattgacctccagtatggctggcccttataccagttccattgt
tggtatgaagtaacttgtgttgaatgctccccagatgggatgtatgctttctgtgggcaa
tatttaaacaccaccactatattccacctaggaaatggggataagcttgcaacagtgacc
tctgagttttctggtggatttgtgaagtccatcctggttctagacacaatccatcaaatg
gtgatgattgacaatgaaggtagtctttctgtctggaacaccaaagatatcacaaatccc
agacttatggaggactacgactgccgaggggatgatagtgaggtggtaggtatagaatta
tcagaggatcagaaatcagtacttatttgcaaagccagaagcattgaggtgcttgacacc
aagctttggaagatggtagagaagtttaaggccaaacgtagtgagagatttgtagctgct
gttctgtcaaagaatggccaaagtattgtagcatcaatggaaaatacttcatccatattt
gtgtggagaagagacagtggacaatgcatggctagtttaatagagatatcaggagccatc
gtcaagttgatcaagtcaacacaccataatttgcttttgtccgtagccagtagtggggtt
ctctcagtgtgggacattgatatcataacagcaatgtcaaacattgacaaaacagggaaa
cagatccaaagtgtacagctgtcaggcagagaagactttgtctacacaatggatgggtct
gaagccatccataagtggaatttcaacacaggtttcattgagatggtgtttaaacatgaa
ggccttgtggagaactgtgttcttaccacatctggtgaccttatggtgacatctgatgac
aaatgtagccaatacatctggcagactgccacaggtgaaaacatcttccggatcaatggc
cagaaaatatcccaacttcttatcacccataatgaccaatttgttgtctctctctgtgaa
caaaatgcctcacgggtctggaggcttgctactggacacaaagtgtgcaacatcctggta
actctccagcatgctctcatcaccacagccaacactttcctggttggtacaactaaaaac
aaactgttggctgtcagcttgtggtccggcagtgtatccaagaagtttgtctgtgatgac
gggatcacaatcataaattttaagctaattccagacagtccagactttgttgtcttcatc
acgtccacagagactgttttcatgtggagtgtagctgatgagtctgtctgcagaagagtg
caactgccaagcaacttcttgaagaacttggaagacttccaaatctcacctaatggaaag
ttgggaattgtatctaaaggagatgacaacattaatgttctagatctacacagtggtaaa
ctgcgcttaatccatgctgcaggcataatatggaggcaaaagttatcaagagatggacgg
tacttggtttacatttgtttccaaaattgtgatgaggacgatgatgcaggtgtggtttct
agtttaattgtcatgcgacttgctgatggaaagagtattggtacctgttctctctacaag
acaccaacctacttgtgcctatcacaacgagcactcaacattattattggctttgaggat
ggtagtattgggacctacacagttgtagaccgtgtggatgcagccctcaaaatcaagatt
gccacctccaacagccggcagattgttaacaatgcctcacagaaaatacgacccaagtgc
agcaccaatgccttcaagactattgctgattgcatgtggagggagtcaactgaagttttc
tctcgagatagccccatcaatgtctctgacagtggggagcctgaaacaacaacacctaca
aaaaaaactgaattactgcaatga
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