Ictalurus punctatus (channel catfish): 108268008
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Entry
108268008 CDS
T04658
Symbol
arhgef18a
Name
(RefSeq) rho guanine nucleotide exchange factor 18a
KO
K21066
A-kinase anchor protein 18
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108268008 (arhgef18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268008 (arhgef18a)
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108268008 (arhgef18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
COG3_N
SpoIIE_N
Motif
Other DBs
NCBI-GeneID:
108268008
NCBI-ProteinID:
XP_017328125
Ensembl:
ENSIPUG00000014965
UniProt:
A0A2D0RE07
LinkDB
All DBs
Position
7:complement(12365145..12379766)
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AA seq
924 aa
AA seq
DB search
MDESDQLRNKPILDELTADGISIEDVQYLALREELESDARDFEAPTWSLTVDPQYVKNFS
KDAVKRQDVIHELIQTEVNHVRTLKLMLFVYMRELRDSLLMDKSQLERLFPYLDRLLHEH
QNFLQRLKHCRRESLEEGSDKNYCISNIGDILITQFSEDCRSRLQDSYGVFCSHHTEAVN
FYKEQLQNNKKFQNLIRRIGQLSIVRRLGVPEGILLITQRITKYPVLVERIIKNTEEGTQ
EHKDLVNAQERIKDTISAVDTQVHQYEQLREIAAQLEPKSYGTTSNGKIFRRDNLLQKDR
RLLREGVLTWKPQNRSKSLDVILVLLPDLLLLLQDKDQKYVFAHLDGKPSVLPLQKLIVR
DAAHSDKVMYLISASDVKADLYEFHASTAEERSSWRQQIWETVEKCPHVEEELMENNDVY
SDKLREAHDLLCEKDAQIEEILRQKLQIFSNLSEVPMENPTTARRLLLQGSAPELQQGEL
LINKAIIHAEALQMQLMDGEMNFIPLSGESDVELRRKSLTLPAYNRMKRSADGFRSRDQR
PNSDPHLRDLYLEPLELSADDEDCSTFPPPACAFRAEWIEAADKLIRTLYSLKALVSQQD
SELEVLRAVQLEHERSSRQRYSSIQDQERQRHLEKQREELLHLQKVHTQQRQEQEEWARE
RQRHLLEMHRREQELSRRMDEYTNKEAWLCAERDVLHRSREEYQQDLERLRDSTRIVEKE
KEKLEQDIKRFRKHKNLTNLGGASHLGGASHQDSAQLVVPYSSADDRLGRSPVQPSLPQE
RPPVVPPRKESMSVSASVKADVPIQLLSTTNEALKSSSIQQQIPTKLAISSGKEKNKSKN
IHHRNNSAASIEVSEVFPIKVSGKETGSLRATKTTNPHKLTADVYQELAVNSKLPHSADT
RRRAAQPQNQQRPAYSSQEDVLFF
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagtgatcagctccgtaacaagcctatcctggatgagttgacggctgatggc
atcagcatcgaggatgtgcagtacttggctctgagggaggaactggaatctgatgctcgg
gattttgaagctcctacatggagtttaactgtagatccgcagtatgtgaagaatttctct
aaagatgctgttaaaaggcaagacgtcatccacgagttgatccagacggaagtaaaccac
gtgcggacgctgaagctcatgctgtttgtgtatatgcgtgagctccgggattcgctgctg
atggacaagtctcagctcgagcgtctcttcccttatctggaccgtttactgcacgaacat
cagaacttcctgcagagactgaaacactgccgcagagagagtctggaggaaggaagtgac
aaaaactactgcatctctaacataggagacatcctcatcactcagttttcggaggattgc
aggagcaggctgcaggacagttacggtgttttctgcagtcatcacaccgaggcagtgaat
ttttacaaagaacaactgcagaacaataaaaagtttcagaatctgatacgaagaatcggt
cagttgtcgatcgtgaggaggctgggcgtgccggaggggattctgctcatcacccagcgc
atcaccaaatacccagtcctggtggagcgcatcattaaaaacactgaagagggcacacag
gagcataaagatcttgtaaatgctcaggagcgcatcaaagacacgatctccgctgtggac
acgcaggtccatcagtacgagcagctgcgggagattgccgctcaacttgaacccaaatcc
tacggcactacgagcaacggcaagattttccgcagagacaatctgcttcagaaggacagg
aggctgttgagagagggcgtactgacctggaaaccccaaaacaggtccaaatcgttggac
gtcatcttggttctgctgcctgatttactgctgctgctacaggacaaagatcagaaatat
gtattcgctcatctggatgggaagccttctgttcttcccctgcagaagctgattgtgagg
gatgcagctcacagtgacaaggtgatgtatctgatctcagcgtctgatgtaaaagccgat
ctgtacgagttccacgcctcaacagctgaagaacgaagcagctggagacagcagatatgg
gaaactgttgagaaatgtccacatgtggaggaagagctcatggagaataatgacgtttac
agtgataaactccgagaagctcacgacctgctgtgtgagaaagatgctcagatcgaggag
atcctcaggcagaagctgcaaattttttccaacctgtcagaggttcccatggagaacccc
actacagcaagacgcctgctgctgcaaggttctgcgcctgagctccagcagggggagctg
ttaattaacaaggccatcatacatgctgaggctttacagatgcagctgatggatggagag
atgaactttattcctctgtctggagagagtgatgtcgagctgcgcagaaaatcactaact
ctgcctgcatacaacagaatgaaaagaagtgctgatggatttcggtccagagatcagaga
ccgaactcagatccccatctcagagacctttaccttgagcccctggagttatctgctgat
gatgaagactgctccacgtttcctcctccagcatgcgccttcagagctgagtggattgag
gctgcagataaactgatacggacgctgtacagtctgaaggcgctggtgtctcagcaggac
agtgagttggaggttctgcgtgcagttcagttggagcatgagcgttcgtcccgtcagcgt
tacagctccatccaggatcaggagcgacagcggcacctggagaagcagcgtgaggagctc
ctccacctgcagaaggtccatacgcagcagcggcaggagcaggaggagtgggctcgcgag
cgtcagcgccacctgctggagatgcacaggcgcgagcaggagctgagccgccgcatggac
gagtacaccaacaaggaggcgtggctctgtgccgagagggacgtcctgcaccgcagccgg
gaggagtaccagcaggacctggagcgtctgagggacagcactcgcattgtggagaaggag
aaggagaaactggagcaggatatcaagagattcagaaaacacaagaacctcaccaatctg
ggtggagcctcacacctgggcggggcctcacatcaggacagcgcacagctggttgttcca
tattcatcagctgacgataggcttggcagatctccggtacagcccagtctgcctcaggag
cgccctccagtggtccctcctcgcaaagagagcatgagtgtctcggcgagcgtcaaagca
gatgttcccatccagctgctgagcaccaccaacgaggcgctaaagtccagcagcatccag
cagcaaatcccaactaaactagccattagcagcgggaaggagaagaacaagagcaagaac
atacatcatcgcaacaacagcgcagcctcgatagaagtttctgaagtgtttcctattaag
gtgtcgggaaaagaaacaggaagtttacgagcaacgaaaaccacgaacccccacaaactc
actgcagacgtttatcaggaactcgctgtgaactcgaagcttccacattcagcagacact
cgccgaagagccgctcagccacagaaccagcagagacccgcgtacagcagccaggaggac
gttctcttcttttag
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