Ictalurus punctatus (channel catfish): 108268020
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Entry
108268020 CDS
T04658
Symbol
pls1
Name
(RefSeq) plastin-1
KO
K17275
plastin-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108268020 (pls1)
04147 Exosome [BR:
ipu04147
]
108268020 (pls1)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108268020 (pls1)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of microglial cells
108268020 (pls1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
CAMSAP_CH
DUF7460
DUF5580
Motif
Other DBs
NCBI-GeneID:
108268020
NCBI-ProteinID:
XP_017328143
Ensembl:
ENSIPUG00000009762
UniProt:
A0A2D0RC72
LinkDB
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Position
7:complement(10342488..10354396)
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AA seq
627 aa
AA seq
DB search
MENNVTQISREDLEELRQAFQKIDIDNSGYVSDYELQELFREASLSLPGYKVREIAERIL
AGDTNKDEKISFEEFVVIYQDIRSKELRGTFRKAISRKDGIRSFGGTSGLSSEGTQHSYS
DEEKVAFVNWINKSLANDPDCQHIIPMDPNTDSLFKSVKDGILLCKMINHSQRDTIDDRV
INTKKRTMFNMTENLILALNSASAIGCMVVNIDAQDMIAGTPHLVLGLLWQIIKIGLFAN
IEISSNEALIALLGEGEDLDQLMSMSPEELLLRWVNYHLKNAGWKSIQNFSEDIKDSKAY
FHLLNEIAPRGDADDEIPIIVDMSGINEDDDLKRAELMLKQAARLDCRQFVSPQDVVAGN
QKLNMAYVANLFNMHPALKKPANNGIDLTMIEGESREDRTFRNWMNSLGINPRVNHLYSD
LMDGLVILQLYEKIQVPVDWKKVNQPPYPVLGAKMKKLENCNYAVDLGKREAKFSLVGIG
GDNINEGNPMHTLALVWQLMRRYTLKVLSDIGDGEKISDQVIVDWVNSTLKNGQKQSTIS
NFRDKSINTSLPVIDLIDTIAPGAIRDEMVKRDDLSEEDMLNNAKYAISMARKIGAKVYA
LPDDLVEVNPKMVMTVFACLMGRSLKK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacgtgacacagatctctcgagaggacctggaggaactcaggcaagccttc
caaaaaatcgacatcgacaacagtggttatgtcagcgattatgagctgcaggagctcttt
cgagaagccagcctctctttgcctgggtacaaggtgcgagagattgcagagaggatcctt
gctggtgacaccaacaaagatgagaagataagctttgaagagtttgtcgtgatataccaa
gatataagaagtaaagagttaagaggaacctttcgcaaggccatctccaggaaggacggg
atccgctcgtttggaggaacatctggattatccagtgaaggaactcagcactcatattct
gatgaagagaaagtggctttcgtcaattggatcaataagtccttggcaaacgatcccgac
tgccaacatatcatccccatggacccgaataccgacagtctgttcaaatcagtgaaggat
ggaatactcctctgcaaaatgatcaaccactcccagcgcgacacgatcgatgacagggtc
atcaacacaaaaaaacgcacaatgttcaacatgacggagaatttgatactagcccttaac
tccgcctcagccatcggttgtatggtggtcaacattgatgctcaggacatgattgctgga
actcctcacctggtactcgggctcctctggcagatcattaagatcggcctgttcgctaat
atcgagatctcaagcaatgaagctctcatcgccctgctcggagagggtgaggacttggac
cagctgatgtccatgtccccggaggagctgttgctgcgctgggtgaactatcacctcaaa
aatgctggatggaaatcaattcaaaacttcagcgaggacatcaaggactccaaggcctac
ttccacttgctgaacgagatcgctcctagaggagatgcagacgatgagataccgatcatt
gtcgacatgtctggcataaacgaggacgatgaccttaagagggcggagcttatgctgaaa
caggcggctcgactcgactgccggcagtttgtctcacctcaggacgtggtggcggggaat
cagaagctcaacatggcctacgtcgccaacctgttcaacatgcacccggctctgaaaaag
cctgccaacaatggcattgacctcactatgatcgagggagaatcccgagaggacagaacc
ttcagaaattggatgaactcgctggggataaatccgagagtcaaccacttatacagtgac
ctgatggatggcctggttattctccagctgtatgagaaaatccaggtccccgtggactgg
aagaaagtaaaccagcctccgtatcctgtccttggtgccaaaatgaaaaaactggagaac
tgcaactacgctgttgatttgggcaaaagggaggcaaagttctcactggtgggcattgga
ggtgacaatatcaatgagggcaatcccatgcacacgctggccctggtgtggcagctaatg
agaaggtacaccctcaaagtgctatctgacattggtgacggagagaaaatcagtgaccaa
gtcatagttgactgggtgaacagcacgctgaaaaatggacagaaacaatctactatcagc
aactttagggacaaatcgatcaacaccagtctcccagtgatcgatctgattgatacgatc
gcacccggagcaatcagagatgagatggtgaagagggacgacctgagtgaggaggacatg
ctcaacaatgcaaagtacgcaatctcgatggctcgcaagattggtgccaaggtgtacgcg
ctgcccgatgacctggtggaggtcaaccccaagatggtgatgactgtgttcgcctgcttg
atggggagaagtctgaaaaagtga
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