Ictalurus punctatus (channel catfish): 108268025
Help
Entry
108268025 CDS
T04658
Name
(RefSeq) nestin
KO
K07609
nestin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108268025
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
108268025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
108268025
NCBI-ProteinID:
XP_017328154
Ensembl:
ENSIPUG00000006413
UniProt:
A0A2D0RC86
LinkDB
All DBs
Position
1:16093638..16100807
Genome browser
AA seq
1356 aa
AA seq
DB search
MEISSFRHPNSHTGEEKYEMLELNRRLESYLNHVKLLEEENQLLWGEIQVMRRNQDTAGQ
RKAQEEALSLARKELQNAWREKDHVELEVSILLEEIEELNILRQKEKSAQTEAKRKLEES
KKALEDERRMQIWLREQATHLEKEVSLQVQVHQEDLAALKSSSAFSKPVLMAPQHSQTFN
LQGLGEEYSQRAAQAWHEAAGMYQTQMKKLEESLDKTRAHMTLIKQEKKESQLQIKDLAK
ELESATAKRELMEKNMVQQRQRQNKDLQHLQAHVEALEAEKLDLGDQIGELLVESRNLLQ
MKMSLSLEVATYRTLLDRESLRVNDQSPSKRNRTVSFLEGITKSPGFPPGTQAISSCLFS
TPLNTTSRSITHKTNLMTQTPTWNLTLRTPHETLKRPQTTKEEEDIVTVEKQKLETATSI
SKKRLTGADSHDHYSAEEEASSIASVSSSEVSKAVDEHESILTRNEDLQEVLKAELGPVL
FSTNETAMITSPARHPQTPESVSSSKHTEEANSSEDGDEEETEVSNEMAQISHAPVSAWE
ENETVIPEERAVVSELELESEDIAENSTQEFRIDVDHAELQLHGENTNKPASLLLQDIPH
LSADSFSPAEDDSEILTWADVKEDVIHFVEEESLKSVPEVERVSVKGTDEVEEKMEVEQA
EWPGIEALEGHELDIKVQEVENEMEQEKKVEQSKEEELTNSEEERIIEEEIGENLGEQKA
ELMINTYEKDNLVAEKDKAVMDTFDKDQVVEHNAEEEQGQSDEDESLNISASWRTDPGEA
DSYAQENTLADTRPLIHYKSDEETDAKIPISHLGVSEPTESEEEREKHEGASHWSQIIAK
RFDTMEDLSEEPELGNIDDIVTDGLVQTVLRESMDVESAVQYESGDLDCHVKALMRDILV
DQSESDFRNNSNENSQGEEETKIENHHLSTLLVEKQEESSQLHDWSASLYNETREMNEQQ
TLVTTQANISEDDITECRPNTENRNIESIEINSEGESEDKKYFDTPLPEPSQEQDLHSDV
LLFKTAITKEQACPKEEEDVQSNLSMLTHVDFTDEFSLHSHPESQTNTNDSDLEEPNNSE
DESPNVSQCSQLLTQTEMRTQRLDWESATTTDVVSNTDPSFTGLLSCLLKEDRSEIYDVP
QAEELENKEEQQYAVDSNSGGMGENADSLPQEWYNLGQEITSASHSILSTTDEFGDVEIE
NKKDNMDIVEGDALKEECQTNEKENDLHSFFSSSLQEDIWSTSKFEMAATYDPNDQMETE
RYSYDRINPIQTMAFGEDWGNLTINQQQTTSCQPPTNSKPDKDMDTFIPQSVEEEGEEQK
MSQAKQLQCKDVKDGDETVHAEDSTDEGDSWSSGEE
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggagatctcaagttttcggcatcctaactcccacactggagaagagaagtatgagatg
ctggagttgaacaggagactggagtcatacctgaaccatgtgaagttactggaagaggag
aaccagcttctttggggggaaatccaggtcatgcgaagaaaccaagacactgcaggccaa
aggaaagctcaggaggaggcactcagtctggccagaaaagagctgcagaatgcctggaga
gagaaggatcatgtggagctagaggtcagcatcctgctggaggagattgaggagctgaac
atactgagacaaaaagagaagtctgcacagactgaggctaagagaaaacttgaagaaagc
aagaaagcactggaggatgaaaggaggatgcagatctggctgagagaacaagcaactcat
cttgaaaaagaggtctctctacaggtgcaggttcatcaagaagacctggcagccctgaag
tcctcgagtgcgttctcaaaacctgtgctaatggctcctcagcacagccagactttcaac
ctccagggcttgggggaagagtactcgcagagagcagcccaggcctggcatgaagcagca
ggcatgtaccagacacagatgaagaagctagaggagagcctggacaaaaccagggctcac
atgacactgatcaaacaagaaaagaaggagagtcagctgcagataaaagatttggccaaa
gagctggaaagtgcaacggccaagagagaactgatggagaagaacatggtacagcagaga
cagaggcagaataaagaccttcaacatcttcaggctcatgtggaggccctggaggcagag
aagctggatctcggagaccagataggtgagctgttggtagagagtcgaaatctactgcag
atgaagatgtctctgagcctcgaggtggccacttacagaacattgctggacagggaaagc
ctgagagttaacgaccaatcaccaagtaagaggaacaggacggtctcatttttagaagga
atcaccaagtcccctgggtttcctccaggcactcaggccatctcctcctgtctgttcagc
actccgttgaatacaacctccagatcaatcacccataaaaccaaccttatgactcaaact
cctacatggaacctgacactaagaaccccacatgagacactcaagagacctcaaaccact
aaggaagaggaagacatcgtaacagtagagaagcaaaaactagaaacagctacatctata
tccaaaaagcgtctaactggagcagactctcatgatcattatagtgctgaggaggaagca
agctctattgcttctgtttcttcctctgaagtgtctaaagctgtagatgagcatgagtcc
atactcactagaaatgaagatttgcaggaagtccttaaggcagaacttggaccggttttg
tttagcaccaatgaaacagcaatgattacctcgccagctagacatccccaaactccagag
agtgtttcttctagtaagcatactgaggaagcaaatagttcagaggatggagatgaagag
gagactgaggtgtctaatgaaatggctcaaatatcacatgcacctgtgtctgcctgggaa
gaaaatgaaacagtgataccagaagagagagctgtagtctctgagctagagttggagtct
gaggacattgctgaaaacagcacacaagaatttaggatagatgttgatcatgcagaatta
cagctgcatggggaaaacactaacaaacctgcctcactattactccaagacataccacat
ttgtctgcagattcctttagtccagctgaagatgacagtgaaattctaacatgggcagat
gtaaaggaagatgttatacattttgttgaagaagaatcactgaagagtgtaccagaagta
gagagagtgtctgtgaaaggaactgacgaagtggaagaaaaaatggaagtagaacaagcc
gaatggcctggcattgaagcactggaaggtcatgagcttgatattaaagtgcaagaagtg
gagaatgaaatggaacaagagaaaaaagtagagcagagcaaggaagaggaattgactaat
agtgaggaggaaaggataatagaggaagagattggagaaaaccttggggaacaaaaagca
gagttaatgataaatacatatgaaaaagataatctggtagctgaaaaagataaggcagtg
atggatacatttgacaaagatcaggtagttgaacataatgcagaagaggagcagggacag
agtgatgaagatgagtcattaaacatctctgcatcatggagaactgaccctggtgaagca
gacagctatgctcaggagaacacactagcagacactcgtcccctcatacactacaagagt
gatgaagagacagatgccaagatcccaatctctcatctgggtgtgagtgaacctactgag
agtgaggaagagagggagaaacatgagggggccagccactggagccagataatcgccaaa
cgctttgacaccatggaggatctatctgaggagccagagctaggcaacatagatgacata
gtcacagatggattagttcaaactgtgttaagagagagcatggatgtggagtccgctgtt
caatatgaaagtggtgaccttgactgccatgtcaaagcactaatgcgagatattttggta
gatcaatcagaaagtgacttcaggaacaatagtaatgagaacagtcagggtgaggaggag
acaaagattgagaatcaccatctgtcaacattattggttgagaaacaggaagagagctca
cagttacatgactggagtgcaagtttatacaatgaaaccagggagatgaatgagcagcag
actcttgtgaccacgcaggccaatatcagtgaagatgacataacagaatgcaggcccaat
acagaaaacaggaatatagaatctatagaaatcaattcagagggtgaaagtgaagacaag
aagtattttgacaccccattgcctgaaccatcccaagaacaagacctgcattctgacgtg
cttctattcaaaactgctattaccaaagaacaagcctgcccaaaagaagaggaagatgtt
cagtcgaacctgtcaatgctcactcatgtagatttcacagatgaattttctctacacagt
catccagaaagccagaccaacactaacgactcagatctggaggagcccaataattctgag
gatgaatctccaaatgtgagccagtgttctcagctgcttacccagactgagatgcggacc
cagcggctagactgggaaagtgcgactactacggatgtagtctcaaacactgatccatca
ttcacaggccttctctcatgtttgttgaaagaggatagatctgaaatttatgatgttcct
caagcagaggaattggagaacaaagaggaacagcaatatgcagtggacagtaatagtggt
ggaatgggtgaaaatgctgacagccttccacaagaatggtacaatttgggccaggaaatt
acaagtgcatcccatagcatccttagcactacagacgaatttggtgatgtagaaatcgag
aacaaaaaagacaatatggatattgtcgaaggagatgctctaaaagaagaatgtcagact
aatgaaaaagaaaatgacctccacagcttctttagttcaagcttacaggaggacatttgg
agtacatcaaaatttgagatggctgctacatatgacccaaatgaccaaatggagactgag
aggtactcatatgacagaattaatccaatccagaccatggcctttggggaggactgggga
aatcttaccatcaaccaacagcaaaccaccagctgccaaccaccaaccaacagcaaaccc
gacaaagacatggacacctttatacctcaatcagtggaggaggaaggggaagaacagaag
atgtcacaggccaaacagttacagtgtaaagatgtgaaagatggggatgaaactgtccat
gcagaggactccactgatgaaggtgactcctggtcttctggtgaagagtaa
DBGET
integrated database retrieval system