KEGG   Ictalurus punctatus (channel catfish): 108268088
Entry
108268088         CDS       T04658                                 
Symbol
gabarapb
Name
(RefSeq) GABA(A) receptor-associated protein b
  KO
K08341  GABA(A) receptor-associated protein
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04068  FoxO signaling pathway
ipu04136  Autophagy - other
ipu04137  Mitophagy - animal
ipu04140  Autophagy - animal
ipu04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    108268088 (gabarapb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108268088 (gabarapb)
   04136 Autophagy - other
    108268088 (gabarapb)
   04137 Mitophagy - animal
    108268088 (gabarapb)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    108268088 (gabarapb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108268088 (gabarapb)
   04121 Ubiquitin system [BR:ipu04121]
    108268088 (gabarapb)
   03029 Mitochondrial biogenesis [BR:ipu03029]
    108268088 (gabarapb)
Membrane trafficking [BR:ipu04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    108268088 (gabarapb)
Ubiquitin system [BR:ipu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   108268088 (gabarapb)
Mitochondrial biogenesis [BR:ipu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    108268088 (gabarapb)
SSDB
Motif
Pfam: ATG8 APG12 NRG4_TM
Other DBs
NCBI-GeneID: 108268088
NCBI-ProteinID: XP_017328274
Ensembl: ENSIPUG00000005735
UniProt: A0A2D0RCK4
LinkDB
Position
7:complement(16534251..16540930)
AA seq 117 aa
MKFQYKEEHSFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF
YFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDESVYGE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaagttccagtataaagaagagcattcttttgagaagaggcgatcagagggtgagaaa
atcaggaagaaatatccggacagggttcctgtaattgttgaaaaagctcccaaagccaga
ataggagacttggataagaagaaatatctggtcccctcggatctcacagtcggccagttc
tattttctcatccgaaaacgaatccacctaagggctgaagatgctctgttcttcttcgta
aacaatgtcattcctcctacctctgcaactatgggcctgttataccaggagcatcatgaa
gaggatttttttctctacattgcctacagtgatgaaagtgtgtatggagaataa

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