Ictalurus punctatus (channel catfish): 108268109
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Entry
108268109 CDS
T04658
Name
(RefSeq) leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X1
KO
K16475
leucine-rich repeat and coiled-coil domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108268109
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108268109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_9
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
108268109
NCBI-ProteinID:
XP_017328308
Ensembl:
ENSIPUG00000003192
UniProt:
W5UE57
LinkDB
All DBs
Position
7:6187547..6202453
Genome browser
AA seq
1043 aa
AA seq
DB search
MASYLANRKRCTAQQCHGNVSPWSCQWLFQAGDEPVMADGELSLIDKNISSLLEVPLKTS
ITSLNLHCNRLSKIEGLTTAWHIRHLDLSSNHITRIEGLGALSQLRTLNLSCNSITKVEG
LNGLVNLTRLNLAYNQINDLTGLLYLHGTEYKLKHLQIHSNRLDSMNHLLQCMVGLHNLR
DLTLSMDDAANPVCHLPGYREMVLQPLQQISTLDGEDRSGKPTPSRDESPMDIPGLEDFL
EFLISTDTSVDVEPVQSDAPLPTPRIDEVLTQFRHRSRVLNPPAESSAQECSIRDDSAKG
NQINELRIKKLEQQVSQLFQKAPVADGPNASSALQSVVRKAKRDTDLTSESEYDSAKENL
QHSRVRRPKIATEKKLVKGKRSDSEASTQKHRSLKLTAGAGQKAAVQTVRLTETAKKGLR
ARQATPDKNSSDTQQETYRVIVEERDQERERRWKAEHAVKKLTEQVKGLETRATEEKELQ
SLALHTTDRLKELLLKERSERTALQTRVEELEERCANAAQQLEQQRSHEAQYKGALHSLQ
ESVSQQEALRASQQVEEMKRKQELENKCAVLKREVEILRASVRQHKDKLQHLQELLTSRE
EAHRKELASRLIPGGAEFREAVEKEVRAVEQRHTLRHREMEQKLVEARHQYATLEDEFRM
ALTIEANRFSEVKEGFEQVSAELAEVKIALTASQQRGKQSDSLVQELTAMVKEQKTRIAD
LIKAKRDAVTELKARVRTLEAGAEEDRRLNVQLELLKKDKSKLISQLTAQETVIEGLRAE
RRLWGQELAQQGASLAQDRGRLEAKIEVLTTELESQKKQNQRDNDSLKIKTKIVDDQTET
IRKLKEAVQERDEQLRALREENLQVQRKFQKEMEGEMASATELRDAMDRLRLRKDELKQQ
LLDKEAEMEELKDAYSASSRKWQDKADLLTKLECQVKRMKEGFDAKEKALLEERDKTTRA
HKAAVEKLHCVDDAFRRQLESLQASHQAELLRLANDKQKQIEQANQRVHQVEDEMRQLLE
ETESNKMAMEEKMRRLTNVLKDF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctagttatctagctaacaggaaacgctgcacagcccagcagtgccatgggaacgtc
tcaccatggagttgtcagtggttatttcaagcaggtgatgagccggtcatggccgatgga
gagctgagtttgatcgataaaaacatttcaagtttattagaggttccactgaagacctct
atcacgtctttaaacctgcactgtaatcgactgtcaaagatcgaagggttgacaacagca
tggcacatacgacatctggacctttcgtcaaatcacatcactcgtatcgagggccttggt
gcgctttctcaattgcgtaccttaaacctgtcttgcaacagcatcactaaggtggaaggt
cttaatggacttgtaaaccttacaaggcttaacttggcttataatcaaataaacgacctc
actggtctcttatatctgcatgggactgaatacaaattgaaacacctccagattcatagc
aatcgactggacagcatgaaccatctgctgcaatgcatggtgggtttgcacaacctgaga
gatctcactctcagtatggatgatgccgctaatcctgtctgccatctaccaggctacagg
gagatggtgctgcagcccttgcaacagatctctactctggatggagaagataggtcggga
aaacccactccgtcacgggatgagagcccaatggacatcccaggcctggaggactttctg
gagtttctaatttcaacagacactagtgtcgacgtcgagccggtccagtcagacgctcct
ctccccactccccggattgacgaggttctgacacagtttcggcatcgcagtagagtttta
aacccacctgctgagtcatcagcgcaggagtgctcaattagagacgattcagccaaaggc
aaccagataaatgagctccgtattaaaaagttggagcagcaggtgtcccaactcttccag
aaggctccggtggctgatggccctaatgcgagctctgcattgcagtccgtggtacgcaaa
gcaaaaagggacacggatctcacatcagagagtgaatatgacagtgcaaaagagaatctg
cagcactcaagagtccgccgacccaaaatcgcaacagagaagaagctggtaaaaggcaaa
cgctctgacagtgaagcaagcacacaaaagcacaggagtttaaagctcactgctggcgct
gggcagaaggcagcagtccaaactgtgaggctgacagaaacagcaaagaaaggcctcaga
gcacgccaggccactccagacaaaaactccagtgacacacaacaggagacctacagggtg
atagtggaggagcgggatcaggagcgggaacggcgctggaaggcagagcatgctgtgaag
aagcttacagagcaggtgaaggggctggaaacacgggccacagaggagaaagaactccag
agcctggccttgcacacaaccgataggctgaaggagttattgctgaaggagcgctctgag
cggacggcactgcagactcgagtggaggagctggaggaacgatgtgcaaatgcagcacaa
cagctggagcagcagcgcagccatgaggcacaatacaagggtgcactgcacagtttgcag
gagagcgtctctcaacaagaggccctcagggccagtcagcaggtggaggagatgaagaga
aagcaggagctggagaacaaatgcgctgttctaaagagagaggtggaaatactcagagca
tctgtgcggcagcataaagataagctacagcacctacaagaactgctgacctccagagag
gaagcgcacaggaaggagctggcttcacggctcattccaggtggcgccgagtttcgtgaa
gctgtggagaaggaagtgagggctgtggagcagagacacactctgagacaccgtgagatg
gaacagaaactggtcgaagcccggcaccaatatgccaccctggaggatgagttccgcatg
gctctcaccatcgaagccaatcgcttctctgaggtgaaagagggctttgagcaggtgtct
gccgagcttgccgaggtgaagatagctttgactgcgtctcagcagagagggaagcagtca
gactctctggtgcaggagctcacagctatggtgaaggagcagaaaacacgcatagccgat
ctcatcaaagccaaacgcgatgctgtaacagaattaaaggcacgagtacggactctagag
gcaggagcagaggaggacaggcgtctaaatgtgcaactggaacttctgaagaaggacaaa
tccaagctgatctcgcagctcactgcacaggagactgttatagaaggactccgagcggag
agaaggctctggggacaggagctcgcccagcaaggagcgtctcttgctcaggatcgaggt
cgcttggaggccaaaattgaggtcctgactactgagctggagtcccagaagaaacagaat
cagagagacaacgactcactaaagatcaaaacgaagatagtggatgatcaaaccgagaca
atccggaagctaaaagaggcagtgcaggaaagggatgagcagctacgtgctctgcgtgag
gagaacctgcaggttcagagaaagttccagaaggaaatggagggtgagatggcctcagca
acagagctccgagatgccatggacagactccgcctcagaaaagatgagctcaagcaacag
ctccttgacaaggaggcagagatggaggagctcaaagacgcctacagtgcctcgagtcgt
aaatggcaggataaagcggacttgctgaccaaactggagtgccaggtgaagcgtatgaag
gagggattcgatgctaaagagaaagcattactggaagagagggataaaaccactcgagca
cacaaggcagcggtcgaaaaacttcactgtgtggacgacgctttccgtagacagctggag
tccttgcaggcttctcatcaggctgagttgctccgattggctaatgacaaacagaaacaa
atagaacaggccaatcagagggtacaccaggtggaggatgagatgaggcagctgctggag
gaaaccgagagcaacaaaatggcaatggaggagaaaatgagacgcctcaccaatgtgctt
aaagacttctaa
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