Ictalurus punctatus (channel catfish): 108268114
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Entry
108268114 CDS
T04658
Name
(RefSeq) C-C motif chemokine 3 isoform X1
KO
K05408
C-C motif chemokine 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108268114
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108268114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108268114
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108268114
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Chemokines
108268114
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Chemokines
108268114
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
CXCL16
Motif
Other DBs
NCBI-GeneID:
108268114
NCBI-ProteinID:
XP_017328322
Ensembl:
ENSIPUG00000003073
ENSIPUG00000003078
UniProt:
A0A2D0RCQ4
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All DBs
Position
7:complement(32832254..32857777)
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AA seq
99 aa
AA seq
DB search
MFSRSLLLVLLGLACLQSFTTAQNGNGPARCCFSFQKPENKIPIRVITAYEVTDLQCAKP
GVIFTLKSGREVCADTSVEWVQKLMKTIDQRSTHPQTTD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcgttctctcctgctggttctgctgggtctcgcctgccttcagtccttcaca
acagcccagaatggaaatggaccagcacgatgctgtttcagcttccagaaacccgagaat
aaaatccctataagagtcattacagcgtatgaagtaacagaccttcagtgtgcaaaacct
ggagtcatctttactctaaagagcggccgtgaggtgtgtgcagacaccagcgtcgagtgg
gtgcagaaactcatgaaaacaattgaccagcgctcgacccatcctcaaacaactgattaa
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