Ictalurus punctatus (channel catfish): 108268134
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Entry
108268134 CDS
T04658
Symbol
chmp5a
Name
(RefSeq) charged multivesicular body protein 5 isoform X1
KO
K12198
charged multivesicular body protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108268134 (chmp5a)
09143 Cell growth and death
04217 Necroptosis
108268134 (chmp5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268134 (chmp5a)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
108268134 (chmp5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
NPV_P10
Hydantoinase_B
Alpha-E
DUF848
C2_ITFG1
Motif
Other DBs
NCBI-GeneID:
108268134
NCBI-ProteinID:
XP_017328367
Ensembl:
ENSIPUG00000004203
UniProt:
W5U9Q7
A0A2D0RCU9
LinkDB
All DBs
Position
7:complement(6781065..6784425)
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AA seq
219 aa
AA seq
DB search
MNRLFGRSKHQAPPSLSDCIGNIDARAEVMEKKIARIDAELLKYKDQMKKTRDGPAKNAV
KQKAMRVLKQKRLYESQRDQLAQQSFNMEQANYTIQSLKDTKTTVEAMKIGAKEMKKSYK
QVKMDQIEDLQDQLEDMMEEASEVQEALSRSYGTPDIDEDELEAELDALGDELLFDDDSS
YLDEASSAPSIPEGVPSDSKTNKDGVLVDEFGLPQIPAT
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggcttttcggtagaagcaagcaccaggcgcctcccagcctttcggactgtatc
ggaaatatcgatgcacgagccgaggtgatggagaagaagatagcgaggatcgatgccgag
ctcctcaaatacaaggaccagatgaaaaagacgagggacggcccggccaagaatgcagtg
aaacagaaggcaatgagagtgctcaagcagaagaggctatatgaaagccaaagagatcag
cttgcccagcagtcctttaacatggaacaggccaactacaccattcagtccttaaaggac
accaaaacaacagttgaagctatgaagattggagcgaaagaaatgaaaaaatcctataag
caagtgaagatggatcaaattgaagacttacaggaccagcttgaggacatgatggaggaa
gccagtgaagtgcaggaggctctgagtcgcagctatggtacaccagacatcgatgaggat
gaactagaagccgaactggatgccctcggagatgagttactgtttgacgacgacagctcc
tatctggacgaagcctcgtctgcaccctccatcccagagggcgtgcccagtgacagcaaa
acaaacaaggatggcgttctggtcgacgagtttggattgccgcagattccagccacatag
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