Ictalurus punctatus (channel catfish): 108268149
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Entry
108268149 CDS
T04658
Name
(RefSeq) protein scribble homolog isoform X17
KO
K16175
protein scribble
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108268149
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
108268149
NCBI-ProteinID:
XP_017328400
Ensembl:
ENSIPUG00000004763
UniProt:
A0A2D0RE36
LinkDB
All DBs
Position
7:7090806..7172954
Genome browser
AA seq
1924 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLHAVPDEIYRYTRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPETIKFCKALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQSLPNDLGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNQLEVLPDALGALPNLRELWLDRNQLSSLPPDLGSLRRLVCLDVSENQLTELPSEIS
GLIALTDLLLSQNHLDAVPDSIGSLKQLSIFKVDQNRLVHLTDSIGECENLTEVMLTENL
LQALPSSLGKLKKLTNLNVDRNRLSSVPAELGGCASLNVLSLRDNRVGKLPAELANATEL
HVLDVAGNRLQNLPFSLANLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
TPSLENLLQNSVDESWPTDTNLNRVSVIQFQDQTKADEEDDESAAEKRQGLQRRATPHPS
ELKVMKNVIEARRNEAYTAKPDEELDSPDTEEKRMSGLSNQSHDSQVSNSTASANSREET
QKVNGIEVELNERHAHEQDDEEEEAEYTEPTVHFAEEPIIRGGDEEDDDDENEEDDDCEH
SDNEARSAPFPAEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLEGFSPDAPTSAPRTPN
DEKDGDDEDEEDNEGASVNTPLLRRLEAAEQEDSRLTQVNSSLQPVKGVSFDQVNNLLIE
PARIEEEELVLSILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGVKVGD
KLLEVNRVDLQGAEHHTAVEALRSSGTAVTMTVLRERMVEPENPITTTPLRPEDDYFPRE
RRSTGLPFSLEPGSPAVSTGPCQRLATCLVRNDKGLGFSIAGGKGSTPYRTGDMGIFISR
IAEGGAAHRDNILHVGDRVISINGVDMAEARHDQAVALLTGTSPTISLLVEREQASAGGS
SGRGRSHSPPPPEPSDSPEQEEPGEDHLGNHLSCPMEDEYPIEEVTLVKTGGPLGLSIVG
GSDHASHPFGISEPGVFISKVIPHGLACQSGLRVGDRILEVNSTDLRHATHQEAVKALLS
NNKEIRMLVRRDPSPPGMQEIVIHKQPGEKLGISIRGGARGHAGNPFDPTDEGIFISKVS
CSGAAARDGRLKVGMRILEVSNHSLLGMTHTEAVRVLRATGDTLVMLVCDGFDPRTVAGM
EASPGVIANPFAAGIVRKNSMESISSIDRDLSPEEMDIMQKEVEMVRETSQWEREEMEKV
ERMRLEREAATRLLEEETESMSTGPLKLDYKTLAALPTTSLQRVSRQVPSAEPPRIDSPV
REPLYSPGSQLPSCHQSSSSAPVAQGRETRFASIHLSSNVTAKDNSATKPGAIQPISRMR
PPASPVSQDGHSSPNPFQHGPSPINSQTTPPAPSPDTFNEFPINIKQAYKAFAAVPHSTA
VLEPPQDLYGQRNNFYPKQTLPEPEECNEVFIGEGEGGVLSPRPSLSSDRHEYRNLAAVP
RLSRPFLESKPPTSSGRGSPEQRSFRDRQKYFEIDVKQQTPDSKPKPRVSLVGEDDLKKM
KEEEAKRTEQIAREYLLDDDEEDEEEDLAKQVAQMKAQGKVILDGVEYKVEPAGGHSSTP
PPRQCATPPNYSATPPSYCGSSGTSSVDGRGDSQRNSLEDSFRLEQRPNSMTGLIPVYPG
ESAAPIRTAKAERRQQERLRVQSPELSVATDKDLSPAEKRALEAEKRAMWRAARPYGLEE
DVRQYEQDLAKRLYQSRVRASLDSATAPPSTCSSSSQPRMKSLEQDALKAQMVIAKSKEG
RKRGTLDQLAESPSPVPTPSPTPMEDVSPRVVTSPGRLSLSEKKFDYRQFAAIPSSKPVY
DIQSPDAADVRFNSDTPSSPVSCVEAEVPVAPVAATSALEEMALYSNKRKLRQGRRSLET
AVPT
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatccctctctggcggtgtaaccgccacgtcgagtcggtggataagcgg
cactgctctctgcacgctgtgcccgatgagatctaccgctacacccgcagcctggaggag
ctcctgctcgacgccaaccagctccgagagctgcccaagcccttcttcaggcttttgaac
ctgcgtaagctaggcctgagtgacaacgagatccagagacttccccctgaggtggccaac
ttcatgcagctggtggagctggacatctctcgaaatgacattcctgagatccccgagacc
attaagttctgtaaggcgctggagattgcggacttcagtggaaaccccctctccagatta
cccgatggctttacacagcttagagcactagcccaccttgcactcaatgacgtgtcacta
caatcactaccaaatgaccttggaaacttggctaacctggtaaccctggagctgagggag
aatctactgaagtctttacccacctctctgtcattcctggttaaactggaacagctagat
ttgggcagcaatcaactggaagtattgccggacgcactgggggctcttcccaacctccgt
gagctgtggttagacaggaaccaactttcttcgctccccccagatctgggaagcttgcgc
cgattggtgtgcctggacgtgtcagagaaccagctcacagagttgccctccgagatcagc
ggcctgatcgccctcactgacctgctgctctcacagaaccatctggacgccgtgcctgac
agcatcggctccttgaaacaattgtctatcttcaaagtggaccagaaccgtctggtgcat
ctaacagattcaatcggcgaatgcgagaacctcacggaagtcatgctgaccgagaatctg
ctacaggcacttcctagttctctgggaaaattgaagaagctgaccaacctgaatgtggac
cgtaaccgcttgagcagcgtacccgctgaattgggtggctgtgccagtctcaacgtgctc
tcgctcagagacaaccgcgtgggcaagctgcctgctgagctcgcgaatgccacggagcta
cacgtgctggatgtggcaggcaacaggctgcagaacctacccttctcactagccaatctg
aacctcaaggccatgtggctggcagagaaccagtcgcaacccatgctcaagtttcagacc
gaggacgacgagcggacaggagagaaggtcctcacctgctacctgctgccccaacagcct
acccccagcttagagaacctgctgcagaacagcgtggacgaaagttggcccacagacact
aatctgaacagagtgtccgtcatccagtttcaggaccaaaccaaggctgatgaggaagat
gatgagagtgcagcggagaaaaggcagggtttgcagaggcgagccacccctcaccctagc
gagctgaaagtgatgaagaacgtgattgaggccagaagaaacgaggcttacacagctaag
ccagatgaagagctggactccccagatactgaggagaaacgtatgagcggattgtccaat
cagagccacgactcccaggtctcgaacagcactgcctcagctaactctcgcgaagagacg
cagaaagtaaacggtatcgaggtggagcttaatgaaagacacgcgcatgaacaggacgac
gaggaagaggaagccgaatacactgagcccaccgtgcactttgccgaggagcccattatc
cgcggcggtgacgaggaggacgacgacgacgagaacgaggaggacgatgactgcgagcat
agcgacaatgaggctcggtcagcgcccttccccgccgagaaacagcgtctcattcgcaag
gacacgccacactacaagaaacacttcaagatcaccaaactgcccaaacctgaggctgta
gctgctttactagagggcttcagccctgacgccccgacgtcagccccccgaacacccaac
gacgaaaaggatggggatgatgaagatgaagaggacaatgagggagcatcggttaacacc
cctctgttacggagactagaggcggctgagcaagaggacagcaggctgactcaggtgaac
agctcgctgcagccggtgaagggggtgtcatttgatcaagtcaataatctgctgattgag
cctgctcgaattgaggaggaagagctggtcctgagcatcctgagacaaactggtggatta
ggcatcagtatagctggggggaaaggatccactccttacaagggagatgatgagggtatc
tttatctcacgagtgtctgaagatggtccagctgcacgagctggggtcaaagtgggagac
aaattacttgaggtaaacagggtcgatctgcagggggcggagcaccacacggcggtggag
gcgttacggagctcgggaacggcagtgaccatgactgtgttgcgtgagcggatggtagag
cccgagaaccctatcaccactacacccctgagaccagaggatgattatttcccccgggag
aggcggtccactggccttcctttcagcctggagcctggatctcctgccgttagcacaggc
ccctgccaacgcctggccacctgcttagtccgcaacgacaagggcttaggcttcagcatc
gctgggggaaaaggctccacgccatatcggacaggagacatgggaatcttcatctctcgc
attgctgaaggaggcgctgctcacagggacaacatcctccacgtgggagacagagtcata
tctatcaatggtgtagacatggcagaagccagacatgaccaagcagtagcgctgcttacc
ggcacctcccccaccatctcgctgctagtggagcgggaacaagcgagcgcgggcggctcc
tcgggccgaggacgctctcactcgcctcctcctccggagccctcggactcgccagagcaa
gaagagcccggagaagaccaccttgggaaccatctcagctgtcctatggaggatgagtac
cccatagaggaagtgaccctggtcaaaacaggtggtcctctgggtctgagcattgtgggt
ggtagtgaccatgccagccacccatttggcataagtgaaccaggagtgtttatttcaaag
gttattcctcatggcttagcctgtcagagtggattacgtgtaggcgaccgcatcctagag
gtaaactccactgacctgcgacatgccacccaccaggaggctgtcaaagccctgctctcc
aacaacaaggagatccgcatgctagtgcgcagagacccctcaccacctggaatgcaggaa
attgtcattcacaagcagcctggagagaagcttggcatcagcatccgtggaggggccaga
gggcatgcaggcaacccctttgatccaacagatgagggcatcttcatctccaaggtgagc
tgcagtggtgctgcagcacgagacggccgcctgaaggtgggtatgagaatcctggaggtg
agcaatcacagtctcctcggcatgactcatacggaggcagtcagggtcttgcgtgccaca
ggagataccttggtcatgctggtgtgtgatggcttcgaccctcgaaccgtcgcaggcatg
gaggcatctccaggtgtcatcgcaaacccgttcgctgctggaattgttcgaaagaacagc
atggagagcatctcctcgatagaccgagatctgagcccagaagagatggacatcatgcag
aaggaggttgagatggtgagagagacgtctcagtgggagcgggaggagatggagaaagtg
gagcgtatgcgcttggagcgtgaagcggctacgcgtctgctggaggaggagactgagagc
atgagcactggacctctgaaactggactacaagacgttggcagctcttcccacaaccagc
ctgcagagggtcagtcggcaggttccatcagctgagcccccaagaattgacagtcctgtc
cgggagcctctgtattccccaggttctcaattgccatcatgtcaccagtcctcgtcctca
gcccctgtcgcacaaggcagggagacccgattcgcaagcattcatttatcctccaatgtg
actgccaaggacaattcagctaccaagcccggtgccatccagcctatctcacgaatgcgg
cctcctgcctctccagtcagccaggacggtcacagtagccccaaccctttccagcatggc
ccttcccccatcaactcccagaccactcctcctgccccatccccagatactttcaacgaa
tttcccatcaatatcaagcaggcatataaggcgtttgctgctgtgccccactccacggct
gtactggagcccccacaggatctctatggtcagaggaacaacttttacccaaagcagaca
ttgccagagccagaggagtgtaatgaagtgtttataggtgagggtgaaggaggggtcctc
agccctcgcccctccctctcatctgaccgtcatgagtacaggaatctggcagctgtgcca
cgcctgtctcgccccttcctggagtctaagccccccacgtcctccgggagagggagccca
gagcagcggtctttcagagacagacagaagtactttgagatcgatgtgaagcagcagaca
ccagacagcaaacccaaacctcgtgtttcacttgtcggagaggacgacctgaaaaaaatg
aaagaggaggaagccaaaagaactgagcagatagcacgtgaatatcttctggatgacgat
gaggaggatgaagaggaagatttggcgaagcaggtggcgcagatgaaggcccagggcaag
gttattctggatggggttgagtataaggttgagcctgctggtggccactcttctactcct
cctcccaggcaatgtgccacgcctccaaactacagtgccacccctcccagctattgtgga
agctcagggacttcctctgtagatggtaggggtgattcccagcgcaattctttggaggat
agcttcagactggagcagagacccaactctatgactggtctgatccccgtgtaccccggc
gagtccgcagctcccatccgtactgccaaggctgagcggagacaacaggagaggctgcgt
gtgcagagcccagagctcagtgtggctacagacaaggatctttctcctgcagagaaacgg
gccctggaggcggagaagagggccatgtggagggcagccaggccttacggtctagaggaa
gacgttaggcagtatgagcaagacctggccaagaggctctaccagtcgcgtgtgagggcg
tcgttagacagtgctacagctcctccctctacctgctcctcttcctctcagcccaggatg
aagtctttagagcaggatgctctcaaggctcagatggtcattgctaagtccaaggaaggc
agaaagcgaggcactctggaccagttagctgaatcgccgtctcctgtacccacgccttcg
cccactcctatggaagatgtcagtcctcgcgttgtgacatcaccaggtcgactgtccctg
tcagaaaagaagtttgactaccgacaattcgctgccattccttcttctaaacccgtatac
gacattcagtctccagatgctgcagatgttcgattcaacagtgacaccccctctagccca
gtttcctgcgtagaagctgaggtgcctgtagctcccgtggccgccacatctgcgctggag
gagatggctctgtacagcaacaagcgtaaactccgacagggccgtcgcagtctagagaca
gccgttcccacataa
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