Ictalurus punctatus (channel catfish): 108268161
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Entry
108268161 CDS
T04658
Symbol
abcf2b
Name
(RefSeq) ATP-binding cassette, sub-family F, member 2b isoform X2
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108268161 (abcf2b)
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108268161 (abcf2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
AAA_28
MMR_HSR1
AAA_22
RsgA_GTPase
AAA_16
NACHT
AAA_14
AAA_33
VapE-like_dom
Dynamin_N
AAA_23
RNA_helicase
MukB
Motif
Other DBs
NCBI-GeneID:
108268161
NCBI-ProteinID:
XP_017328439
Ensembl:
ENSIPUG00000005806
UniProt:
W5URY3
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All DBs
Position
7:complement(7285654..7298563)
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AA seq
610 aa
AA seq
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MPSDLAKKKAAKKKEAAKARQRVKKHEEVEQPEENGAVPNGDINGDVSALAKELDEFELR
KIEARAVTGVLASHPNSTDVHISSLSLTFHGQELLSDTSLELNSGRRYGLIGLNGTGKSM
LLSAIGHREIPIPEHIDIYHLTREMAPSEKTALQCVMEVDEERIQLEKEAERLAHEDSEC
EKLMEIYERLEELDADKAEVRASRILFGLGFTPTMQHKKLKDFSGGWRMRVSLARALFIK
PFMLLLDEPTNHLDLDACVWLEEELKSFKRILVLISHSQDFLNGVCTNIIHLHQRKLRYY
TGNYDQYVKTREELEENQMKRYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQKM
VASGLTSRVVTDKTLSFYFPPCGKIPPPVIMVQNVSFRYSDETPYIYKNLEFGIDLDTRV
ALVGPNGAGKSTLLKLLMGELLPTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYMMKC
YPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEPTNH
LDIETIDALAEAVNEFEGGMMLVSHDFRLIQQVAQEIWVCENQTITKWNGDILAYKEHLK
SKIDKQTHDV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagaccttgccaagaagaaggctgccaagaagaaagaggcagccaaggctcgt
cagagggtcaaaaaacacgaggaggtcgagcagccagaggaaaatggagccgttccaaat
ggggacataaatggagatgtttctgccctggctaaagagctagatgagtttgagctgagg
aagatagaggctcgggcagttacaggtgtcttggcatcgcaccccaacagtacagacgtt
cacatcagcagtctttcactcactttccatgggcaggagctgctcagcgacacaagtctg
gaactaaactcaggcagacgctacgggctcatcggcctcaatggcacaggtaaatctatg
ctcctgtctgcgatcggccaccgagagattcctatcccagagcacatagacatttatcat
ctgacacgtgagatggctcccagtgagaagacagctttacagtgtgtgatggaggtggat
gaggagaggatccagctggagaaggaggcagaaagactggcccatgaggactcagagtgc
gagaagctgatggagatctacgagcgcttggaagagctggatgcggacaaagccgaggtt
cgagcttcacgcattctctttggcctgggctttaccccaaccatgcagcacaaaaagctc
aaagacttcagcggtggttggagaatgcgtgtctccttggccagagcgctgttcattaaa
cctttcatgctgttactggatgaacccactaaccaccttgacctggatgcctgcgtgtgg
ctggaggaggaactcaaatcgtttaagcgaattcttgtactcatttcacactcccaagac
ttcctgaatggtgtttgcaccaatatcattcatctacaccaaaggaaactcagatactac
acaggcaattatgaccagtacgtgaagaccagggaggagcttgaggagaaccagatgaaa
cgctacaactgggagcaggaccagatagcacacatgaagaactatatcgcccgatttggt
cacggctcggctaagctggctcgccaggctcagagcaaagagaagacgttgcagaagatg
gtggcctcaggcctgacatcccgtgtagttacagataagactctgtcattttattttcct
ccctgtgggaagattccgccgcctgtcatcatggtgcagaatgtcagtttcagatattcc
gacgagacgccatatatttataaaaacctggagtttggcattgacctggatacgcgagtg
gctctagtgggccctaatggagcggggaagtccacactactgaaactgctgatgggggag
ctcctcccaactgatggtatgatcaggaaacactcccatgtgaagattggcaggtatcac
cagcatctgactgaacagctggagttggacctgtctcctctagagtacatgatgaagtgt
tacccagagatcaaagagaaagaggagatgaggaagatcatcggacggtacggcctgacg
ggtaaacagcaggtgagtcccatcaggaatctatcagatggtcagaagtgtcgagtgtgt
ttcgcctggctggcctggcagaacccacacatgctcttcctcgatgaacctaccaatcac
ctggacattgagaccatcgacgcacttgctgaagccgtcaacgagtttgaaggagggatg
atgctggtcagccacgacttcagactcatccagcaggtggctcaggaaatttgggtgtgc
gagaaccagaccatcaccaaatggaacggggacattttggcgtacaaggaacacctgaag
tcaaaaatcgataaacagacgcacgacgtttga
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