Ictalurus punctatus (channel catfish): 108268210
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Entry
108268210 CDS
T04658
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108268210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108268210
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108268210
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
HECT type E3
108268210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
108268210
NCBI-ProteinID:
XP_053537617
Ensembl:
ENSIPUG00000013840
UniProt:
W5UD75
LinkDB
All DBs
Position
7:30947611..30983027
Genome browser
AA seq
1092 aa
AA seq
DB search
MLQLHGKSVAMFSFEGDFKRTPKVSLGGATKKEEKASLLHRTQEERRKREDERKRLKSAI
IIQSYIRGFQERKRQHGIQRSHFDHCVCESQCSSGSMLPDAAPLSLLIHRLLFFYRCSED
THRLIWLCQSVVKHQGQFVKLLAGPERSTCVFQIKRLLRHCCRILQLCKNDGVNVAIPMR
MLEVFCSERTYLPPLQDAGAAAALTEQVLYYLVQKGYYRTLYMLANHKLPSSLDYSDAPS
LPLARMLLEHILKPLHFTYSSCPAGARQLVFSAFTEDFISPPFTEQMFHFFVPAMADPRL
CFPFHEFLFSLQATISSSDRLQSHAPWLFYFVLLLGETGLSSLSEEGLLLYLSCLQALLP
LFPVSESCTRADVNSDSEDEDDASTHPSPVQDDTRMSVKLISQLCVQKLDSKQQTNALLS
LVWRDSASEDVFTMVASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWHLITSMKTKM
ITGSLVPLLQLMSRGSPMSAEDSNRIIPLFYLFSSLFSHSLISIHDTEFFGEAMDGERQA
SMMPFSLPELVTLSRCLRDACLGIIKLAHPETKSGHSEEYAAAFRSVGVKPSSQVQQQRI
QNQKKRWVQLFKVITNLVKMLKARDSRRPFCPGGHWLSNDVHIWADKVTQLYVPSTRLMW
RRGLRGIIGPLRSTLNVDLVPPPLSVSEERQLAILTELPFVVPFEERVKIFQRLIYADKR
DAQEDGPFHDGITITIRRNYIYEDAYDKLSPENEPNLKKRIRVHLLNALGLDEAGIDGGG
IFREFLNELLKSGFNPNQGFFRTTNEGLLYPSPTAKMLMGESFTRHYYFLGRILGKALYE
NMLVELPFASFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEGDVEDLGLNFTIVN
NDLGEAQVVELKPGGKDIPVTTANRIAYIHLVADYRLNKQIRAHCLAFRQGLSNLLNLEW
LRMFDQQEIQVLISGAHIPICLDDLKEFTRYSGGYSETHPVIKIFWEVVENFSDEEKRKL
LKFVTSCSRPPLLGFKELHPAFCIHNGGNDLERLPTASTCMNLLKLPEFCDQHLMRSKLL
YAIESSSGFELS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagctccatgggaaaagtgtagccatgttcagcttcgagggagatttcaagcgg
acgcccaaagtgtccctcggaggggcgactaaaaaggaggaaaaagcgtcgcttcttcac
cggactcaggaggaaagacgcaagcgagaggatgagaggaaaaggctgaaaagcgccatc
atcatccagtcttacatacgaggcttccaggagagaaagcgacaacatggcattcagcga
agtcatttcgaccactgtgtgtgtgagagtcagtgttcctccggatccatgctcccggac
gctgcaccgctcagtctgctcatccacaggctgctgttcttctaccgctgcagtgaggac
acacaccggctgatctggctgtgtcagagtgtagtgaagcaccagggccagtttgtgaag
ctgctggccggacctgagagaagcacttgcgtgttccagatcaagaggcttctcagacac
tgctgcagaatcctgcagctgtgtaaaaacgacggcgtaaacgtggccatccccatgcgc
atgctggaggtcttttgctcggagaggacctacctgccccctctacaggacgcgggcgca
gccgccgcgctcaccgagcaggttttgtactatctggttcagaaaggttactacaggact
ctgtacatgttggccaatcacaagttaccgtccagtctggattacagcgacgccccctca
cttcccctggcgcgcatgctgctggaacacatactcaaaccactgcactttacctacagc
tcctgtcctgcgggtgccaggcagttagtgttctcagcctttacagaagacttcatctct
cctcctttcaccgagcagatgtttcacttcttcgtgccggcgatggcggaccccagactc
tgcttcccgtttcacgagttcctgttctccctgcaggccaccatctcctcgtcagaccgg
ctccaaagccacgccccctggctcttctacttcgtgctgttgctcggggaaacaggcctc
agctctctatcagaagaagggctgctgttgtatttgagttgtctgcaggctctgctccct
ctgtttcctgtgagcgagagctgcaccagagccgacgtcaacagcgactcggaggacgaa
gatgatgcctcgacacacccttctcctgtacaggatgacaccaggatgtcggtgaagttg
atctcacagctgtgtgtacagaagttggactcgaagcagcagacgaacgctctgctgtct
ctggtgtggagagactcggccagcgaggacgtcttcaccatggtggcgtccatctgccac
accctcatggtgcagcaccgcatgatggtgcccaaagtcaggctcctgtacagtttggcc
ttcaacgctcgcttcctccgacacctgtggcacttgataacatccatgaagaccaaaatg
atcacagggtctctggtgccgttgctgcagttgatgtctcgcggctctcccatgtctgct
gaggactcgaacaggatcatccctctcttctacttgttcagctcgttgttcagccactct
ctcatttccatccacgacacagagttcttcggggaagccatggatggtgagaggcaggcg
tccatgatgccgttctctctcccggagttggtgactctgtcccggtgtttgcgtgatgcc
tgtctggggatcatcaagctggcgcatcccgagactaagagcggccacagtgaggaatac
gcagccgccttccgcagcgtcggagtcaaacccagcagccaagtgcagcagcagcgcatc
cagaaccagaagaaacgctgggtccagctgttcaaggtgatcacgaacctggtgaagatg
ttgaaggcgcgggacagcaggaggccgttctgcccagggggtcactggctgtccaacgat
gtccacatctgggctgataaggtgactcagctgtacgtgccctctactcgactcatgtgg
aggagggggctcaggggcataatcggaccactccggtccacgttaaacgttgacttggtg
cctccgccgctgtccgtttcggaggagagacaactggccatcctcacagagctgcccttc
gtcgtgcccttcgaggagagagtcaagatcttccagaggctgatctacgccgataaacga
gacgcccaggaggatggccctttccatgacggcatcaccatcaccatccggagaaactac
atctacgaggacgcgtacgacaaactgtctccggagaacgagcccaacctgaaaaagcgt
atccgggtgcacttgctgaacgctctcggcctggacgaggccggcatcgacggcggaggg
attttccgcgagttcctcaacgagctgctcaagtcggggttcaaccccaaccagggcttc
ttcaggaccaccaacgagggtctgctgtacccgagccccacggccaagatgctcatgggc
gagagcttcacgcgacactactacttcctgggccggatactgggcaaggctctgtatgag
aacatgttagtggagctgccgtttgctagtttcttcctgtccaagctgctcgggaccagt
gctgacgtggacattcatcacctggcctcgctggaccccgagatgtaccggaaccttctg
ttcctcaagagctatgagggagacgtggaggatctgggcctgaacttcaccatcgtcaac
aatgacctgggagaggctcaggtggttgagctgaagccgggggggaaggacatcccggtt
accacggcgaaccgcatcgcctacatccatttagtggccgattaccgcctgaacaaacag
atccgagctcactgcctggcgttcagacagggcctgtccaacctgctcaacctcgagtgg
ctgcgcatgtttgaccagcaggagattcaggttttgatctccggcgcacatatacctatc
tgtctggacgacctgaaggaattcacccgttactcaggaggttactcggaaacgcacccg
gtcatcaagatcttctgggaggtggtggagaacttcagcgacgaggagaaacgcaagctg
ctcaagttcgtcaccagctgctcacgtcctcctctgctggggtttaaagagctccaccct
gccttctgcatccataacggggggaacgatctggagcgcctccccaccgccagcacttgc
atgaacctcctcaagctgcccgagttctgcgaccagcatctgatgaggagcaagctgctc
tacgccatcgagtcgtcctcgggcttcgaactcagctga
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integrated database retrieval system
