Ictalurus punctatus (channel catfish): 108268218
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Entry
108268218 CDS
T04658
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
ipu
Ictalurus punctatus (channel catfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
108268218
NCBI-ProteinID:
XP_017328533
Ensembl:
ENSIPUG00000007475
UniProt:
W5UBP6
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All DBs
Position
1:16691941..16839018
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AA seq
1057 aa
AA seq
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MRLVFGLRPLLALTLSLTGLLLLSNVATPFPQDLEPISIVGSEYSYLYPGFQGNMSDNDT
VRLGLDFQRMLRINHMLYIAARDHVFVVNLSTSTEQIVPQQKLTWKTKDVEKCTVRGKNS
DECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMATLEQVGEEVVGQARCPFESRQSNV
GLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGNYVY
FFFSEIAVEYTTLGKVVFSRVGRVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYF
DVLQSLTNVMQINHRPAVLGVFTTQANSITGSAVCAFYMDDIERVFSGKFKEQKTSESAW
TPVPDEQVPKPRPGSCAGDGSAAVYKSSTSFPDETLTFIKSYPLMDEAVPSVNGRPCFTR
TTKRFKLTQIAVDTAAGPYKNHTVLFLGSENGHVQKILASTHPNSTYSSQLLEDIDVYNP
NKCNVRGEDRRILGLELDKDHHALFVAFSSCVVRVPLSRCADYGTCKKSCLSSRDPYCIW
LKTGSCATVAPGLKSGFEQDVETGYSQYPDSCHDVLATTRKQNPALDSAYGKTSPTSASP
TIQGPALPKGPSVSEKGTHPAEGERGGRGSPGLEPINVEMEGVRRPPEVDKSNHSVHYTL
LIACVLVAFVLGAFLSGFLVSCYCNYNVNKTKRLAKDPEAPIPHALSLRSLAKLNGLLEN
QGKDEKLEVSSPKLYNSFFQNGKDHSGRRHGHHGVMADLIHPHHHHSSELSGLPTPDSTP
ELPIKSMKAFKNQWEKNQNCNNAKEPKSHNMAGSRPSSGIPQQVFPFTHGLASRQSLGGS
VHLEERKIHNAERIPSQPQHCYPHKIVDVTSLDELLKHIHEINVATGKTPTVLTSSMSAN
SGQMAFANRVQPQIPETESAPYYSSSTLPRDSLTRRMDVPPEMPSQHQSTLERVSRHASQ
RHSLMSAGGAVCREPSFSRRTHHPPLLARVNSTGGCDARHPLIPNGYLTRQHSYSEQPEL
QRGAVVRRTASLKPDVPPKPLFIPASSPVNQAGKFNY
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcggttggtttttgggttgcggcccctgctggccctgacccttagcctcactggcctg
ttactgctgtccaatgttgccacgccctttccccaggacctggagccaatcagcatagtt
gggagtgagtactcctacctgtaccctggtttccagggcaacatgtcggataatgacacg
gtgaggctcggtctggacttccagagaatgttgcgcataaaccacatgctgtacattgct
gccagggatcacgtctttgtcgtcaatctcagcacttcgactgaacaaatcgttcctcag
cagaaactgacctggaagacaaaggatgtagagaaatgcacagtgaggggcaagaacagc
gatgagtgctacaactacatcaaagtgctggtgcctcgtaacgatgagacactgtttgca
tgtgggaccaacgcgttcaaccccacctgtcgcaactacaagatggccactctggagcag
gttggagaggaggtggttggtcaggcgcggtgtccttttgaatcgcgccagtccaacgtt
ggcctgttcgctggtggcgatttttactcggcaacaatgaccgattttttagctagtgat
gccgtgatctacagaagtttgggggaaagtagtccagtcctgcgaaccgtgaagtacgac
tctaaatggctgcgagagcctcattttcttcatgccattgagtacgggaactatgtgtac
tttttcttcagtgagattgcagtggagtacactactcttggcaaggtggtgttttccagg
gtgggtcgggtatgtaagaatgataatggaggttctccaagggtcctggagcggtactgg
acatcatttcttaaagcccggctgaactgttctgttccgggagattcgttcttctacttt
gatgtcctgcaatccttgacaaatgtgatgcagattaaccacagacctgctgtgctggga
gttttcaccacacaggccaacagtatcaccggctctgctgtttgtgccttctatatggat
gacatcgagcgagtgtttagtggcaagtttaaagaacagaagaccagcgagtcggcctgg
acccccgtacctgatgagcaagtgcccaaacccaggccaggttcctgtgcaggagatggt
tctgcggcagtgtacaagtcctccacctccttccctgatgagacactcaccttcatcaag
tcctatccactcatggacgaagccgtaccatcagtgaacgggcgtccatgcttcacgaga
actacgaaaaggttcaagttgacccagatagccgtggacacggccgccggaccttacaag
aaccacacggttctattcctgggctcggaaaacgggcacgttcagaagatcctcgccagc
acgcaccctaactccacctacagcagccagctcctggaggacatcgatgtgtacaaccca
aacaaatgcaatgtacgtggggaagaccggaggattctgggactggagctggataaggac
catcacgccctgtttgttgccttctctagctgtgtggtacgcgtgcctctgagccggtgt
gccgactatggaacctgcaagaagagctgtttgtcctcacgagacccttactgtatctgg
ctgaagacggggagttgtgccactgtggcgccgggactaaaatcagggtttgagcaggat
gtggagactggctactcgcagtatccagacagctgtcacgatgtcttggcaaccacacga
aagcagaaccctgcactggattcagcatatggaaagacctcacccacaagcgccagccca
accattcagggaccagctctgcccaaagggccaagtgtctctgagaaaggtacccaccct
gcggagggggagcggggagggcggggctcccctggcttggagccaatcaatgtggagatg
gagggagtccgtcgtcctcctgaagttgacaagtccaaccacagtgttcactacactctg
ctaatagcatgtgtgcttgtggcgtttgtcttgggtgccttcctctctggcttccttgtc
tcttgttactgtaactacaatgtaaacaagactaagagactggccaaggacccggaggct
cccatccctcatgctctgtctctgcgtagtctggccaagctgaatggccttctggaaaac
cagggcaaggatgagaagctggaggtatcttctccaaagctctataactccttcttccaa
aatgggaaggatcattcagggcggagacatggccaccatggtgtcatggcagatctgatc
catcctcatcaccaccactcctcagagctgtctggacttcccacacctgattcaactcca
gaactgcccatcaagagcatgaaggccttcaagaaccagtgggagaagaatcagaactgt
aataatgccaaagagcccaagtctcacaatatggctgggtccaggcccagctctggaatt
cctcagcaggtctttccattcacccatggtctggctagccgacagtctctgggtggttct
gtgcacctggaagagcgtaagatacacaacgcagagcgcattccaagtcagccacagcac
tgctacccccacaaaattgtggatgtgacttcacttgatgagctcctcaagcacatccat
gagattaatgttgcgactgggaagacccccaccgtacttacctcatccatgtcagctaac
tcaggccagatggcatttgccaaccgtgtgcagccacaaatccctgaaactgagtctgct
ccctactacagctcctccacactgcccagagacagcctgacacgtcgcatggatgtacca
ccagagatgccttctcagcaccagtccacactggagagggtttcgcgtcatgcctcccag
cgccactctctcatgtcagccggaggagctgtttgccgagagccaagctttagccgtcgc
acgcaccaccctccgcttctcgcccgggtcaactccactggtggctgtgatgcacgtcac
ccactcatacccaatggctacctgacgcgccagcacagctacagcgagcagcccgagctc
cagcgcggagctgtggtccgtcgcacagcctcactgaaacctgatgtccctcccaaacca
ctctttatccctgcctcctcacctgtaaatcaggctgggaagttcaactactga
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